| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1005 |
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| Symbol | |
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| ID | 5868765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1144017 |
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| End bp | 1146605 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546106 |
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| Product | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor |
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| Protein accession | YP_001667251 |
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| Protein GI | 167032020 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACTG GTCCTACCCG CTCGTCCACC CTTCCCCGCC GTACAGGGCA ACTGTCCCTA
TTGACCCTGG CCCTGCTTGC CAGCGGTGCC TGCAGCCTCC CGGCGCTGGC CGCCGAGCCG
GCCCAGGCCA GCAGCCCGCG CATGGGCGAC TATCGCTTCA GCATCGGCCA GCAGCCCCTG
GTGTCGGCGA TCAACGCCTT CAGCCAGGTC ACCGGCTGGC AGGTCGGCTT CAGCGCCGAG
CTGGCCGACG GCGTGGCCTC GCCTGGGGTA CAGGGTTCGC TGCCGCCAGA TGCCGCACTC
AAGCGCCTGC TGCATGGAAC GGGCCTGAGC TTTCGCAAGA TCAGCAACGG CAACGTGGTT
CTTGAGCGCC AGACCGTCGG TAACGTGATC GCTTTGCAGC AGGTGACCGT CAGCGCCACC
CGTAGCGCCC AGGACGTCAG CCAGGTGCCG AGCACGGTCA GCGTGCAGAC CCGCGAGCAA
CTGGACCGGC AAAACGTCAA CAACATCCAG GACCTGGTGC GTTACGAGCC GGGGGTGTCG
GTGGCAGGTA CCGGCCAGCG CAGCGGCCTG AACGGCTACA ACATCCGGGG TATCGACGGC
GAGCGGATCC TCACCCAGGT TGACGGCGTA TCGATCCCGG ATAGCTTCTT CTACGGCCCC
TATGCCCAGA CCCAACGCAA CTACGTCGAC CCAGAAATCG TCAAGCGCGT GGAAATCCTC
CGCGGCCCGG CCTCGGTGCT GTACGGCAGC AACGCCATCG GCGGCGCGGT CAGCTACTTC
ACCCTCGACC CGGACGACAT CATCAAGCCT GGCAAAGACG TGGGTGCACG CCTGAAAACC
GGTTACAGCT CGGCTGACGA AAGCTGGCTG ACCTCCGCCA CCGTCGCCGG CCGCGAGGGT
GATTTCGATG GCCTGCTGCA CCTGAGCCAG CGCAACGGCC ACGAGACTGA AACCCACGGC
AGCCACAGCG GTGCCGGCCT GTCGCGCACC GAAGCCAATC CAATGGATGT GCGCACCACC
AACGTGCTGG CCAAGCTGGG CTGGAACTAC GCCGATGACG CGCGCCTGGG CTTCACCTAC
GAACGCTACA AGGATGACCG CGACCAGAAC ATCCTCAGCG CGGTGGGCGG GCCGTTCATT
CCGGGCTTTG GCGGCATGGG CTACTACAAG GCGCGCAATG GCAACGACAC CATCACCCGC
GAGCGCTTTG GCATCAACCA TGAGTTCGGC CTGGATTCGC TGGTCGCCGA CCACGTCAAG
TGGAGCCTGA ACTACCAGAT CGCCAAGACC GACCAGCACA CCGAAGAAGT CTACGCACCG
CCTGGCCGCC AGGTGCTGCG TACCCGCGAC ACCACCTACA AGGACCGCCA GTGGGTGTTC
GACGCCCAGC TGGACAAGGC CTTCAGCATC GGCGCCACCG ACCATCTGCT GACCTATGGC
ACCACGATCA AGCACGAGAA AATCACCGGG TCCCGCAGCG GCACCGGCAC CTGCCTGACC
GTGGGCTCCG GTTGCTCCGC CGCTGGCGCC GAACGCCCGG CAGACGGCCA GGTTCTGGTC
AGCGACTTCC CGGACCCGAC CGTAAACACC TACAGCCTGT TCGTGCAGGA TGAAATCCGC
TGGAACAACT GGACCTTCAT GCCCGGTGCG CGCTACGACT ACACGCGCAT GGAACCCAAG
TTCACCGACG AATTCCTGCG CGGCCTGGAG TCCACCGGCA CGGCACCCAC CTCCCAGGAC
GACTCGGACA AGAAGTGGCA CCGTGTGTCG CCCAAGCTCG GCGTGACCTA CGCCTTCAAC
GACAACTACA CCTGGTATGG CCAGTACGCC GAAGGCTTCC GCACCCCGAC CGCCAAGGCC
ATGTACGGAA AATTCGTCAA CCTTGAGGAA GGTTACCGCG TAGAAGGCAA CCCCGGCCTG
GAACCAGAAA AGAGCAAAAG CTACGAAACC GGCCTGCGTG GCAACTTCGA CGCGGGTAAC
TTCGACGTGG CGGTGTTCTA CAACAAGTAC CGCGACTTCA TCGACGAAGA CGCCGTGCAA
AGCGCCAACC TGGAACAGAC CTTCCAGGCC AACAACATCA AGCACGCCAC CATCAAGGGT
GCCGAGGTCA AGGGCCGCCT GAACCTGGAC CACTTCGGCG CACCGCAGGG CCTCTATACC
CAGGGCTCGA TTGCCTACAC CTATGGTCGT AACGATGACA CCGGTGAACC GCTGAACAGC
GTCAACCCGC TGAAGGGCGT ATTCGGCCTG GGTTACGAGC AGCAGAACTA CGGCGGCCTG
CTGAGCTGGA CACTGGTCAA GCGCAAGACC CGTGTCGACG ACTCCAGCTT CTACTCCCCC
GACGGTTCGA GCTCGAAGTT CCGCACCCCG GGCTACGGCG TGCTGGACCT GACCGGCTTC
TACAAGGTTA CCGACGACGT GACCATCAAC GCCGGCCTGT ACAACCTCAC CGACAAGAAA
TACTGGCAGT GGGATTCGGT ACGCAGCTAC GACGGCCAGG GTGAGGCAGC TGTGACCCAG
CCAGCCAACA TCGACCGCTT GACCATGCCA GGGCGCAACT TCGGTATCAA TGTGGTTTGG
GATATCTGA
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| Protein sequence | MSTGPTRSST LPRRTGQLSL LTLALLASGA CSLPALAAEP AQASSPRMGD YRFSIGQQPL
VSAINAFSQV TGWQVGFSAE LADGVASPGV QGSLPPDAAL KRLLHGTGLS FRKISNGNVV
LERQTVGNVI ALQQVTVSAT RSAQDVSQVP STVSVQTREQ LDRQNVNNIQ DLVRYEPGVS
VAGTGQRSGL NGYNIRGIDG ERILTQVDGV SIPDSFFYGP YAQTQRNYVD PEIVKRVEIL
RGPASVLYGS NAIGGAVSYF TLDPDDIIKP GKDVGARLKT GYSSADESWL TSATVAGREG
DFDGLLHLSQ RNGHETETHG SHSGAGLSRT EANPMDVRTT NVLAKLGWNY ADDARLGFTY
ERYKDDRDQN ILSAVGGPFI PGFGGMGYYK ARNGNDTITR ERFGINHEFG LDSLVADHVK
WSLNYQIAKT DQHTEEVYAP PGRQVLRTRD TTYKDRQWVF DAQLDKAFSI GATDHLLTYG
TTIKHEKITG SRSGTGTCLT VGSGCSAAGA ERPADGQVLV SDFPDPTVNT YSLFVQDEIR
WNNWTFMPGA RYDYTRMEPK FTDEFLRGLE STGTAPTSQD DSDKKWHRVS PKLGVTYAFN
DNYTWYGQYA EGFRTPTAKA MYGKFVNLEE GYRVEGNPGL EPEKSKSYET GLRGNFDAGN
FDVAVFYNKY RDFIDEDAVQ SANLEQTFQA NNIKHATIKG AEVKGRLNLD HFGAPQGLYT
QGSIAYTYGR NDDTGEPLNS VNPLKGVFGL GYEQQNYGGL LSWTLVKRKT RVDDSSFYSP
DGSSSKFRTP GYGVLDLTGF YKVTDDVTIN AGLYNLTDKK YWQWDSVRSY DGQGEAAVTQ
PANIDRLTMP GRNFGINVVW DI
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