| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_1002 |
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| Symbol | |
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| ID | 5868762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1141345 |
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| End bp | 1142772 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546103 |
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| Product | arginine/ornithine antiporter |
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| Protein accession | YP_001667248 |
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| Protein GI | 167032017 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC CGGGACAGAA GCTGCGCCTG GGCGCGCTGA TCGCGCTGGT GGTCGGCTCG
ATGATCGGTG GCGGGATCTT CTCGCTGCCG CAGAACATGG CCGCGCGCGC CGATGTGGGG
GCTGTGTTGA TCGGCTGGGG GATCACCGCG GTTGGCATGC TGGCCCTGGC CTTCGTGTTC
CAGACCTTGG CCAACCGCAA GCCCGAGCTG GACTCAGGGG TGTACGCTTA TGCCAAGGCC
GGTTTCGGCG AGTACATGGG CTTTTCCTCG GCCTGGGGCT ACTGGATCAG TGCCTGGCTG
GGTAACGTTG GTTATTTCGT ACTGCTGTTC AGCACCCTGG GCTTCTACTT TCCCGTTTTC
GGCGAAGGCA ACACGCCCAT TGCCATCGGC TGCGCCTCGC TGTTGCTGTG GTCTGTGCAT
TTCCTGGTGC TGCGAGGCAT CAAGGAAGCC GCGTTCATCA ACCAGGTGAC CACGGTAGCC
AAGGTGGTGC CGCTGTTGAT CTTTGTGGTG ATCGCGGCAT TCGCATTCCG CGCCGATATC
TTCACCCGGG ATATCTGGGG CCTCAGCAAC CCGCAGTTCG GCAGCGTGCT GGAGCAGGTG
CGCAACATGA TGCTGGTGAC CGTGTTCGTA TTCATCGGCA TCGAGGGCGC CAGCGTGTAT
TCCGGGCGCG CCGAGCGTCG TTCTGACGTG GGTAAGGCCA CGGTCATCGG CTTTCTCGGT
GTACTTGCGC TGCTGGTGCT GGTCAACGTG TTGTCGCTGG GGGTGATGAC CCAGCCGGAG
TTGGCCGGGC TGCAGAACCC CTCGCTGGCC TCGGTGCTGG AGCATATTGT CGGCCCCTGG
GGCGCCTTGC TGATCAGTCT CGGCCTGGCA GTCTCGCTGC TCGGCGCCTT GCTTTCGTGG
GCGCTGCTGT GTGCCGAGAT CCTGTTTGCC ACGGCGCGGG ACAAGACCAT GCCGCGCTTT
CTAGCCAAGG AAAACGCCAA CCATGTGCCA GCCAACGCCC TTTGGCTGAC CAACTGCATG
ATCCAGGGGT TCCTGCTGAT TACGCTGTTC TCGGCCGGTA CCTACACCAG CCTCATCTAC
CTGGCCTCGT CGATGATCCT GGTGCCCTAC CTGTGGTCGG CGGCCTATGC CGTGCTGCTG
GCGGTGCGCG CAGAAACCTA TGCCGGGCAG CCGGGGTTGC GGCGCAAGGA CTTGCTGGTG
GCGCTGGTTG CCTTGCTGTA TGCCGTGTGG CTGCTGTATG CGGGCGGGCT CAAGTACCTG
TTGCTGTCGG CGCTGCTGTA CGCCCCAGGT GTGATCCTGT TCGCCAGGGC CAAGCATGAG
CAAGGCCAGA CCCTGTTCAC TAGCTGGGAA AAACTGATTT TCGCCGCTGT GCTGGTGGGC
GCTGCGCTGG CGGCCTACGC CTTGTATTCA GGGCTGCTGA GCTTGTGA
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| Protein sequence | MSEPGQKLRL GALIALVVGS MIGGGIFSLP QNMAARADVG AVLIGWGITA VGMLALAFVF
QTLANRKPEL DSGVYAYAKA GFGEYMGFSS AWGYWISAWL GNVGYFVLLF STLGFYFPVF
GEGNTPIAIG CASLLLWSVH FLVLRGIKEA AFINQVTTVA KVVPLLIFVV IAAFAFRADI
FTRDIWGLSN PQFGSVLEQV RNMMLVTVFV FIGIEGASVY SGRAERRSDV GKATVIGFLG
VLALLVLVNV LSLGVMTQPE LAGLQNPSLA SVLEHIVGPW GALLISLGLA VSLLGALLSW
ALLCAEILFA TARDKTMPRF LAKENANHVP ANALWLTNCM IQGFLLITLF SAGTYTSLIY
LASSMILVPY LWSAAYAVLL AVRAETYAGQ PGLRRKDLLV ALVALLYAVW LLYAGGLKYL
LLSALLYAPG VILFARAKHE QGQTLFTSWE KLIFAAVLVG AALAAYALYS GLLSL
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