Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_1001 |
Symbol | |
ID | 5868761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1139481 |
End bp | 1140908 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641546102 |
Product | arginine/ornithine antiporter |
Protein accession | YP_001667247 |
Protein GI | 167032016 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATT CATCCGGAAA ACTAAAGCTT GGTGCGTTAG TTGCACTTGT CGTCGGGTCG ATGATTGGTG GCGGGATCTT CTCGCTGCCG CAAAACATGG CCGCCAGCGC AGGGGTTGGC GCGGTGTTGA TCGGTTGGGG CATCACCGCG GTCGGCATGC TGACCCTGGC GTTCGTGTTC CAGACCTTGG CCAACCGCAA GCCTGATCTG GATGGCGGGG TATATGCCTA CGCCAAGGCC GGTTTTGGCG ACTACATGGG CTTCTCCTCA GCCTGGGGCT ACTGGATCAG TGCCTGGCTG GGCAACGTCG GCTACTTCGT GCTGTTGTTC AGCACCTTGG GCTACTTCTT CCCAATCTTC GGTGAAGGCA ACACGCCGGC CGCCATCATT GGCGCGTCGA TCCTGTTGTG GGCCGTGCAC TTCCTGGTAT TGCGCGGTAT CAAGGAGGCA GCGTTCATCA ACCTGGTCAC CACCGTGGCC AAAGTGGTGC CGCTGGTGCT GTTCGCCCTG ATCTGCCTGT TCGCCTTCAG GCTCGATATC TTCACCGCCG ACATCTGGGC CGTAGGCACA CCAGAGCTTG GCAGCGTGAT GAACCAGGTG CGCAACATGA TGCTGGTCAC CGTGTGGGTG TTCATCGGCA TCGAGGGCGC GAGCATTTTC TCGTCCCGGG CGGAAAAACG CTCTGACGTG GGTAAGGCCA CGGTCATCGG CTTCGTTACC GTGCTGCTGT TCCTGGTGCT GGTCAACGTG CTGTCGCTGG GCATCATGAC CCAACCAGAG CTGGCCAAGC TGCAGAACCC GTCGATGGCC GCCGTGCTGG AACATGTGGT CGGCCACTGG GGCGCGGTGC TGATCAGCGT CGGCCTGATC ATCTCGCTGC TGGGGGCCCT GCTGTCGTGG GTGCTGCTGT GCGCCGAGAT CATGTTCGCC GCCGCCAAGG ACCACACCAT GCCGGAGTTC CTGCGCCGCG AGAACGCCAA CCAGGTACCG GCCAACGCCC TGTGGCTGAC CAACGCCATG GTGCAGATCT TCCTGGTGAT CACGCTGTTC TCCAACAGCA CCTACCTGTC GCTGATCTAC CTCGCCACCT CGATGATCCT GGTGCCCTAC CTGTGGTCGG CGGCCTACGC CTTCCTGCTG GCACTGCGCA GCGAAACCTA CGAACAGGCC CTGGCCGAGC GCAAGAAAGA CCTGATCATC GGCGGTATCG CCTTGTTGTA CGCCGTCTGG CTGCTGTACG CCGGCGGTGT GAAATACCTG CTGCTCTCGG CCCTGCTCTA CGCACCTGGC GCCATCCTGT TCGCCAAGGC CAAGCGTGAG GTAGGCCAAC CTGTCTTCAC CAACGTGGAA AAACTGATCT TCGCAGCCGT GGTCGTCGGC GCCCTGGTGG CAGCCTTTGG CCTGTACGAC GGCTTCCTGA CCCTTTGA
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Protein sequence | MSDSSGKLKL GALVALVVGS MIGGGIFSLP QNMAASAGVG AVLIGWGITA VGMLTLAFVF QTLANRKPDL DGGVYAYAKA GFGDYMGFSS AWGYWISAWL GNVGYFVLLF STLGYFFPIF GEGNTPAAII GASILLWAVH FLVLRGIKEA AFINLVTTVA KVVPLVLFAL ICLFAFRLDI FTADIWAVGT PELGSVMNQV RNMMLVTVWV FIGIEGASIF SSRAEKRSDV GKATVIGFVT VLLFLVLVNV LSLGIMTQPE LAKLQNPSMA AVLEHVVGHW GAVLISVGLI ISLLGALLSW VLLCAEIMFA AAKDHTMPEF LRRENANQVP ANALWLTNAM VQIFLVITLF SNSTYLSLIY LATSMILVPY LWSAAYAFLL ALRSETYEQA LAERKKDLII GGIALLYAVW LLYAGGVKYL LLSALLYAPG AILFAKAKRE VGQPVFTNVE KLIFAAVVVG ALVAAFGLYD GFLTL
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