Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0995 |
Symbol | |
ID | 5868755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1132683 |
End bp | 1133888 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641546096 |
Product | sodium/glutamate symporter |
Protein accession | YP_001667241 |
Protein GI | 167032010 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0786] Na+/glutamate symporter |
TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAC TCGATTTTTA CGGGACACTT GTAGCCGCCT CTTTAGTATT GCTACTGGGG CGTAGTTTGG TCGCACGAAT TGGTTTCCTG CGTACTTACA ATATCCCGGA GCCTGTTGCA GGCGGCCTGG TCGTTGCCTT GTCACTCTTG GCCTTGCGCA GTTTCGATGT ACACGTCCAG TTTGATACCT CGCTGCAAAC GCCGTTGATG TTGGCATTCT TCGCCACCAT CGGCTTGAGT GCAGACTTCG CCAGCCTGAA AAAGGGCGGG CGCGTGGTGG CGGTGTTTTT GCTGGTGGTC ACAGGCTTGC TGCTGGTTCA GAACGCCATG GGCATCGGCC TGGCAACAGC ATTGGGGCTC GATCCGCTGA TGGGCTTGCT GACCGGTTCT ATCAGTTTGT CGGGGGGCCA CGGTACAGGC GCTGCCTGGG GCGCAACCTT CACCGAGAGA TTTGGCCTGG CTTCGGCATC CGAACTGGCA ATGGCCTCTG CCACCTTCGG CCTGGTGCTG GGCGGCTTGA TTGGTGGTCC CGTCGCCAGG ATGTTGATCA AGCGCGTCAA GGCACCCGGT ATCGAAGAAG AAGTTCCGCA GTTACCAAAG GGTTTCGAAC ACCCGCATAA AGAGCGCCTG ATTACGCCAT TTACATTTAT CGAGACCCTC GCACTTATTG CCGTCAGCTT GCTGGCCGGC ACACTACTTA ATAGCGCATT GAAAGGCACA ACATTTGAAC TACCGACCTT CGTCTGCGTA CTCTTCGTGG GGGTAGTGTT GCGCAACGGG CTTTCAGCAA TCGGCTTTTA CCGTGTATTC GAGCGGGAAG TGTCAGTAAT GGGCAACGTG AGTTTGTCCC TGTTCCTGGC CATTGCCTTG ATGTCGCTCA AATTGTGGGA CCTGGCAGCC CTGGCCTTAC CCTTCTTCAT CTTGTTGGCC GTGCAGACGT TGGTCATGGC GCTATTCGCG ATCTTCGTGA CCTTCAGGGT GATGGGGCGC AACTACGATG CGGCAGTCCT GGCCGCAGGG CACTGCGGCT TCGGCTTGGG TGCGACGCCG ACGGCCATCG CCAACATGCA GGCGGTGACC CAGCGCTACG GCGCCTCCCA GATTGCCTTT CTGGTGGTGC CGATGGTTGG CGCGTTCTTC ATCGACATCA TCAATGTCGT CGTGATCAAG TTGTACCTGG CATTGCTCCT CCTTATCGGA GGATGA
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Protein sequence | MIELDFYGTL VAASLVLLLG RSLVARIGFL RTYNIPEPVA GGLVVALSLL ALRSFDVHVQ FDTSLQTPLM LAFFATIGLS ADFASLKKGG RVVAVFLLVV TGLLLVQNAM GIGLATALGL DPLMGLLTGS ISLSGGHGTG AAWGATFTER FGLASASELA MASATFGLVL GGLIGGPVAR MLIKRVKAPG IEEEVPQLPK GFEHPHKERL ITPFTFIETL ALIAVSLLAG TLLNSALKGT TFELPTFVCV LFVGVVLRNG LSAIGFYRVF EREVSVMGNV SLSLFLAIAL MSLKLWDLAA LALPFFILLA VQTLVMALFA IFVTFRVMGR NYDAAVLAAG HCGFGLGATP TAIANMQAVT QRYGASQIAF LVVPMVGAFF IDIINVVVIK LYLALLLLIG G
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