| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0992 |
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| Symbol | |
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| ID | 5868752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1127625 |
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| End bp | 1129001 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641546093 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_001667238 |
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| Protein GI | 167032007 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTGA GTGTCTTCGA CCTGTTCAAG ATCGGCATCG GCCCCTCCAG TTCACACACA
GTCGGCCCGA TGCGTGCCGC TGCGCGCTTT GCCGAAGGGC TGCGCCGTGA CGGCCTGCTT
GCCAGCACCG CCAGCGTCAG GGCCGAGCTG TATGGCTCAC TGGGCGCCAC CGGCAAGGGC
CATGGCAGTG ACAAGGCCGT GCTGCTGGGC CTTGAAGGCG AACACCCAGA CATTATCGAC
ACCGACAGCA TCCCGGCTCG GCTGCAGGCC ATCCGCGACA GCGGCCGCAT CAACCTGCTG
GGCGAGCACA GCATTGCGTT CATCGAAAAG CAGCACCTGG CGATGATCCG CAAGCCGCTG
GACTACCACC CCAATGGCAT GATCTTCCGC GCGTTCGACG AGGCCGGCCT GCAAATCCGC
AGCCGCGAGT ACTACTCGGT GGGCGGCGGT TTCGTGGTGG ATGAGGACGC CGCCGGCCAT
GACCGCATCG TCGAGGACAG CACTGTGCTG GCCTACCCCT TCAAGACGGC CAAGGAACTG
CTAGGCCATT GCTCTGCAAT GCAACTGTCA GTCAGCCAAG TGATGTTGGC CAACGAGGCC
GCCTGGCGCC CAGAGGCAGA AACCCGCGCC GGGCTGCTGC GCATCTGGCA GGTGATGCAG
GATTGCGTCG AAGCCGGTTG CCAGCACGAA GGTATCTTGC CAGGAGGGCT CAAGGTAAAA
CGCCGGGCAC CAGCCCTGTA CCGCCAACTG AGCCGCCACC CGGAGGCCAG CCTGCGTGAC
GCCCTGTCGG TGCTTGACTG GGTCAATCTC TACGCTTTGG CGGTGAACGA GGAAAACGCC
TATGGCGGGC GTGTGGTTAC CGCCCCCACC AACGGTGCGG CGGGCATCGT CCCGGCGGTA
CTGCACTACT ACATGCGTTT CGTGCCGGGC GCCAGCGAGG ACGGGGTGGT GCGCTTTCTG
CTCACCGCTG CGGCCATCGG CATCCTGTAC AAGGAAAACG CCTCCATATC CGGCGCCGAA
GTGGGCTGCC AGGGAGAAGT CGGCGTCGCC TGTTCGATGG CCGCCGGGGC GTTGTGCGAA
GTGATGGGCG GCAGCGTGCA GCAGGTGGAG AACGCCGCCG AAATCGGCAT GGAACACAAC
CTGGGCCTGA CCTGCGACCC GATCGGAGGC CTCGTGCAGG TGCCCTGCAT CGAACGCAAT
GCCATGGGTT CGGTGAAAGC CATCAACGCG GTGCGCATGG CCTTGCGCGG GGACGGCCAG
CACTTCGTGT CCCTCGACAA GGTCATCCGC ACCATGCGCC AGACTGGCGC CGACATGAAA
AGCAAATACA AAGAGACCGC CCGAGGCGGC CTGGCCGTCA ACATCATCGA ATGTTGA
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| Protein sequence | MSLSVFDLFK IGIGPSSSHT VGPMRAAARF AEGLRRDGLL ASTASVRAEL YGSLGATGKG
HGSDKAVLLG LEGEHPDIID TDSIPARLQA IRDSGRINLL GEHSIAFIEK QHLAMIRKPL
DYHPNGMIFR AFDEAGLQIR SREYYSVGGG FVVDEDAAGH DRIVEDSTVL AYPFKTAKEL
LGHCSAMQLS VSQVMLANEA AWRPEAETRA GLLRIWQVMQ DCVEAGCQHE GILPGGLKVK
RRAPALYRQL SRHPEASLRD ALSVLDWVNL YALAVNEENA YGGRVVTAPT NGAAGIVPAV
LHYYMRFVPG ASEDGVVRFL LTAAAIGILY KENASISGAE VGCQGEVGVA CSMAAGALCE
VMGGSVQQVE NAAEIGMEHN LGLTCDPIGG LVQVPCIERN AMGSVKAINA VRMALRGDGQ
HFVSLDKVIR TMRQTGADMK SKYKETARGG LAVNIIEC
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