| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0989 |
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| Symbol | |
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| ID | 5868749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1125326 |
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| End bp | 1125814 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641546090 |
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| Product | RDD domain-containing protein |
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| Protein accession | YP_001667235 |
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| Protein GI | 167032004 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1714] Predicted membrane protein/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00320129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGC CTCTGCTCAC ACCCCAGGGT GATTTTCCGC CGGTCGGCCT GGGCCGGCGC
CTGGCGGCGA TGTTCTATGA CTTTCTGCTG TGTACGGCAC TGCTGATCGT AACCGCTGGT
GCCTACAAGA TGATCCAGAT GTCGATTATC GGCGAGGCGC GTATGCGCGA GCTGACCGAG
GCCGGCGCAC TGGATGGCGA CCCTCTGCTG TCAACGGTGT TGCTGTTCGC CCTGTTCGGC
TTCTTTGCCA AGTTCTGGAC CCACGGTGGG CAGACCCTGG GCATGCAGGT GTGGGGTGTG
CGGGTGCAGA ACGCCGATGG CTCGGCCATC AGCCTGTGGC AGGCGCTGTT GCGCTTTGTG
GTATCGATCG CCTCATGGCT GTGCCTAGGG CTGGGTTTTT TCTGGGTGCT GATCGACAAG
CGCAAGCGCG GTTGGCATGA CATCTACTCG GAAAGCCAAC TGGTGCGGGT GCCGAAGCAG
AAGAAATGA
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| Protein sequence | MSKPLLTPQG DFPPVGLGRR LAAMFYDFLL CTALLIVTAG AYKMIQMSII GEARMRELTE
AGALDGDPLL STVLLFALFG FFAKFWTHGG QTLGMQVWGV RVQNADGSAI SLWQALLRFV
VSIASWLCLG LGFFWVLIDK RKRGWHDIYS ESQLVRVPKQ KK
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