| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0983 |
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| Symbol | valS |
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| ID | 5868743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1117442 |
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| End bp | 1120288 |
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| Gene Length | 2847 bp |
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| Protein Length | 948 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641546084 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001667229 |
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| Protein GI | 167031998 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGA CCTACCAGCC GCACGCTATT GAAACTTCCT GGTACAACAC CTGGGAGTCC
GAGAACTATT TCGCCCCGCA AGGTGCAGGC GAGTCCTACA CCATCATGAT CCCGCCGCCG
AACGTCACCG GCAGCCTGCA CATGGGCCAC GGGTTCAACA ACGCGATCAT GGACGCCCTG
ATCCGTTTCC GTCGCATGCA AGGCCGCGAC ACCCTGTGGC AGCCAGGCAC CGACCACGCC
GGTATCGCCA CGCAGATGCT GGTCGAGCGC CAGCTCGAAG CCAAAGGCCA GAACCGTCAT
GACCTGGGCC GCGAAAAGTT CCTGGAAAAG GTCTGGGAGT GGAAGGATCA GTCCGGTGGC
AACATCAGCC GCCAGATCCG TCGCCTGGGC TCGTCGGTAG ACTGGAGCCG CGAGCGCTTC
ACCATGGACG ACGGCCTCTC CGAAGCCGTT AAAGAAGCGT TCGTGCGCCT GCATGAAGAC
GGCCTTATCT ACCGCGGCAA GCGCCTGGTC AACTGGGACA CCAAGCTGCA CACGGCCATC
TCCGACCTCG AAGTGGAAAA CCACGACGAG AAAGGCCACC TGTGGAACCT GCGCTACCCG
CTGGCCGACG GCGCCAAGAC CGCCGAAGGC CAGGATTACC TGGTCGTTGC CACCACGCGT
CCAGAAACCC TGCTGGGTGA CGCCGCCGTG GCCGTCAACC CGAACGACGA ACGTTACCAG
GCACTGATCG GCAAGTTCGT TGAACTGCCA CTGGTCGGTC GCCGCATTCC GATCATCGCC
GACGACTACT GCGACCCAGA ATTCGGTACC GGTTGCGTGA AGATCACCCC GGCCCACGAC
TTCAACGACT ACGAAGTCGG CAAGCGCCAC AACCTGCCGC TGCTGAACAT CTTCGACAAG
AACGCCTTCG TGCTGGCCAG CGCCCAGGCC TTCAACCTCG ACGGCAGCGT CAACGAGCAG
GTCGACACCC GACTGCCGGC CCAGTACGCC AACCTCGACC GCTTTGTCGC GCGCAAGCAG
ATCGTCGCCG ACCTGGACGC CCAGGGCCTG CTGGTCAGCA TCGACGACCA CGCGCTGAAA
GTGCCGAAAG GCGACCGCTC CGGCACTGTC ATCGAGCCGT GGCTGACCGA CCAGTGGTAC
GTTTCCACCA AGCCGCTGGC AGAACCCGCC ATCGCCGCTG TGGAAGATGG CCGCATCCAG
TTCGTGCCCA AGCAGTACGA GAACATGTAC TTCTCCTGGA TGCGCGATAT CCAGGACTGG
TGCATCAGCC GCCAGCTGTG GTGGGGCCAC CGCATTCCGG CGTGGTACGA CGAGGCCGGC
CAGGTCTATG TCGGCCGCGA CGAGGCTGAA GTGCGCACCA AGCATAACCT GGGCGCCGAC
GTGGTCCTGC GCCAGGACGA CGACGTGCTC GACACCTGGT TCAGCTCGGG CCTGTGGACC
TTCTCCACCC TGGGCTGGCC GGAACAGACC GAATTCCTCA AGAAGTTCCA CTCCACCGAC
GTGTTGGTGA CTGGCTTCGA CATCATCTTC TTCTGGGTTG CGCGCATGAT CATGCTGACC
ATGCACCTGA TCAAGAACGA AGACGGCACC CCGCAGGTAC CGTTCAAGAC CGTGTACGTG
CACGGCCTGG TACGTGACGG CCAGGGCCAG AAGATGTCCA AGTCCAAAGG CAACGTCCTG
GACCCGCTGG ACATCGTCGA CGGCATCACC CTCGATGCCC TGCTGGAAAA ACGCACCAGC
GGCATGATGC AGCCCAAGCT TGCCGAAAAA ATCGCCAAGC AGACCAAGGC CGAGTTCCCT
GAAGGTATCG CCAGCTACGG CACCGACGCC CTGCGCTTCA CCTTCTGCTC GCTGGCCTCC
ACTGGCCGCG ACATCAAGTT CGACATGGGC CGCGTCGAAG GCTACCGCAA CTTCTGCAAC
AAGATCTGGA ACGCTGCCCG CTACGTGCTG GACAAGGGCG AAGACTGCGG TCAGAACGGC
GAAGCCTACG AACTGTCGCT GGCCGACCGC TGGATCATCT CGCAACTGCA GCGCACCGAA
GCCGAAGTGA CCCGCCAGCT GGAGCAGTTC CGCTTCGACC TGGCCAGCCA GGCGTTGTAC
GAGTTCATCT GGAACCAGTA CTGCGACTGG TACCTGGAGC TGTCCAAGCC GGTACTGTGG
GACGAAAACG CCCCGGTCGA GCGCGCCCGT GGCACCCGCC GCACCCTGGT GCGCGTGCTG
GAAGTAGCGC TGCGCCTGGC GCACCCGTTC ATGCCGTTCA TCACCGAAGA AATCTGGCAG
CGCATCGCGC CGCTGGCTGG CATCGATGGC AAGACCATCA TGCTGCAGCC GTGGCCAGTG
GCCAATGAAG CGCGCATCGA CGCCGCTGCA GAAGGCGACA TCGAGTGGCT GAAAGAGCTG
ATGGTCGGCC TGCGCAACAT CCGCGCCGAG ATGAACATCG GCCCCGGCAA GCCGCTGCCG
CTGTTCCTGA AGAACGCCAA CGCCGACGAC CAGCGCCGCC TGCAGGAAAA CGAAGCGCTG
CTGAAGAAGC TGGCCAAGGT CGAGTCGTTC ACCGTCCTCG GCGATGCCGA CGAAGCGCCG
CTGTCGGCCA CCGCACTGGT GGGCGATCTG CAGGTGCTGG TGCCGATGGC AGGCCTGATC
GACAAAGACG CCGAGTTGGC TCGCCTGAAC AAGGAAATCC AGCGTCTGCA AGGTGAAGTC
CAGCGCGTGG GCGGCAAGCT GTCCAACGCC GCCTTCGTCG ACAAGGCGCC GCCTGCGGTG
ATCGAGAAGG AGCGCGCCAA GCTGGCCGAG TCCGAGCAGG CCCTGGCCAA CTTCACCGAG
CAACATGCGC GGATTGCAGC GCTGTAA
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| Protein sequence | MDKTYQPHAI ETSWYNTWES ENYFAPQGAG ESYTIMIPPP NVTGSLHMGH GFNNAIMDAL
IRFRRMQGRD TLWQPGTDHA GIATQMLVER QLEAKGQNRH DLGREKFLEK VWEWKDQSGG
NISRQIRRLG SSVDWSRERF TMDDGLSEAV KEAFVRLHED GLIYRGKRLV NWDTKLHTAI
SDLEVENHDE KGHLWNLRYP LADGAKTAEG QDYLVVATTR PETLLGDAAV AVNPNDERYQ
ALIGKFVELP LVGRRIPIIA DDYCDPEFGT GCVKITPAHD FNDYEVGKRH NLPLLNIFDK
NAFVLASAQA FNLDGSVNEQ VDTRLPAQYA NLDRFVARKQ IVADLDAQGL LVSIDDHALK
VPKGDRSGTV IEPWLTDQWY VSTKPLAEPA IAAVEDGRIQ FVPKQYENMY FSWMRDIQDW
CISRQLWWGH RIPAWYDEAG QVYVGRDEAE VRTKHNLGAD VVLRQDDDVL DTWFSSGLWT
FSTLGWPEQT EFLKKFHSTD VLVTGFDIIF FWVARMIMLT MHLIKNEDGT PQVPFKTVYV
HGLVRDGQGQ KMSKSKGNVL DPLDIVDGIT LDALLEKRTS GMMQPKLAEK IAKQTKAEFP
EGIASYGTDA LRFTFCSLAS TGRDIKFDMG RVEGYRNFCN KIWNAARYVL DKGEDCGQNG
EAYELSLADR WIISQLQRTE AEVTRQLEQF RFDLASQALY EFIWNQYCDW YLELSKPVLW
DENAPVERAR GTRRTLVRVL EVALRLAHPF MPFITEEIWQ RIAPLAGIDG KTIMLQPWPV
ANEARIDAAA EGDIEWLKEL MVGLRNIRAE MNIGPGKPLP LFLKNANADD QRRLQENEAL
LKKLAKVESF TVLGDADEAP LSATALVGDL QVLVPMAGLI DKDAELARLN KEIQRLQGEV
QRVGGKLSNA AFVDKAPPAV IEKERAKLAE SEQALANFTE QHARIAAL
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