Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0960 |
Symbol | |
ID | 5868720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1099008 |
End bp | 1099733 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641546061 |
Product | ABC transporter related |
Protein accession | YP_001667206 |
Protein GI | 167031975 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCC TCAAAGCCCA GCACCTGGCC AAGAGCTACA AGGGCCGGCA GGTGGTACGT GATGTCAGCC TGTCGATCGA CAGCGGCCAG ATCGTCGGCC TGCTCGGCCC TAACGGCGCC GGCAAGACCA CCTGCTTCTA CATGATCGTC GGGCTGGTCC AGGCCGAACA GGGCCGGGTA CTGATCGACA ACCTCGATGT CAGCCATCAG CCCATGCATG GCCGTGCGCG CGCCGGTATC GGCTACCTGC CGCAGGAAGC TTCGATCTTC CGCAAGCTGT CGGTGGCCGA CAACATCATG GCCATCCTCG AAACCCGCAA GGACCTGGAC CGCGAAGGCC GCCGCAAGGA GCTGGAAAGC CTGCTGCAGG AGTTCCACAT CAGCCACATC CGCGACAACC TCGGCATGAG CCTGTCCGGC GGTGAACGCC GCCGCGTCGA AATTGCCCGC GCCCTGGCGA CCGCACCCAA GTTCATCCTG CTGGACGAAC CGTTCGCAGG TGTCGACCCG ATCTCGGTCG GCGACATCAA GCAGATCATC CACCACCTCA AGGCCAAAGG TATCGGTGTA CTGATCACCG ATCACAACGT GCGTGAGACC CTGGATATCT GCGAAACCGC CTACATCGTC AACGATGGCC GGTTGATTGC CGAAGGCGAC GCCGAAACCA TCCTTGCCAA CGATCTGGTC AAAGAGGTTT ACCTGGGCCA CGAGTTCCGC CTCTGA
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Protein sequence | MATLKAQHLA KSYKGRQVVR DVSLSIDSGQ IVGLLGPNGA GKTTCFYMIV GLVQAEQGRV LIDNLDVSHQ PMHGRARAGI GYLPQEASIF RKLSVADNIM AILETRKDLD REGRRKELES LLQEFHISHI RDNLGMSLSG GERRRVEIAR ALATAPKFIL LDEPFAGVDP ISVGDIKQII HHLKAKGIGV LITDHNVRET LDICETAYIV NDGRLIAEGD AETILANDLV KEVYLGHEFR L
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