Gene PputGB1_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0960 
Symbol 
ID5868720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1099008 
End bp1099733 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content62% 
IMG OID641546061 
ProductABC transporter related 
Protein accessionYP_001667206 
Protein GI167031975 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCC TCAAAGCCCA GCACCTGGCC AAGAGCTACA AGGGCCGGCA GGTGGTACGT 
GATGTCAGCC TGTCGATCGA CAGCGGCCAG ATCGTCGGCC TGCTCGGCCC TAACGGCGCC
GGCAAGACCA CCTGCTTCTA CATGATCGTC GGGCTGGTCC AGGCCGAACA GGGCCGGGTA
CTGATCGACA ACCTCGATGT CAGCCATCAG CCCATGCATG GCCGTGCGCG CGCCGGTATC
GGCTACCTGC CGCAGGAAGC TTCGATCTTC CGCAAGCTGT CGGTGGCCGA CAACATCATG
GCCATCCTCG AAACCCGCAA GGACCTGGAC CGCGAAGGCC GCCGCAAGGA GCTGGAAAGC
CTGCTGCAGG AGTTCCACAT CAGCCACATC CGCGACAACC TCGGCATGAG CCTGTCCGGC
GGTGAACGCC GCCGCGTCGA AATTGCCCGC GCCCTGGCGA CCGCACCCAA GTTCATCCTG
CTGGACGAAC CGTTCGCAGG TGTCGACCCG ATCTCGGTCG GCGACATCAA GCAGATCATC
CACCACCTCA AGGCCAAAGG TATCGGTGTA CTGATCACCG ATCACAACGT GCGTGAGACC
CTGGATATCT GCGAAACCGC CTACATCGTC AACGATGGCC GGTTGATTGC CGAAGGCGAC
GCCGAAACCA TCCTTGCCAA CGATCTGGTC AAAGAGGTTT ACCTGGGCCA CGAGTTCCGC
CTCTGA
 
Protein sequence
MATLKAQHLA KSYKGRQVVR DVSLSIDSGQ IVGLLGPNGA GKTTCFYMIV GLVQAEQGRV 
LIDNLDVSHQ PMHGRARAGI GYLPQEASIF RKLSVADNIM AILETRKDLD REGRRKELES
LLQEFHISHI RDNLGMSLSG GERRRVEIAR ALATAPKFIL LDEPFAGVDP ISVGDIKQII
HHLKAKGIGV LITDHNVRET LDICETAYIV NDGRLIAEGD AETILANDLV KEVYLGHEFR
L