Gene PputGB1_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0946 
Symbol 
ID5868706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1087044 
End bp1087895 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content66% 
IMG OID641546047 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001667192 
Protein GI167031961 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.552016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAG CGGTAATCCA GATGGTCAGC CAGGATGACG TGCTGGCCAA CCTGCAGCGT 
GCCGGTGCCC TGCTGGAGCA GGCAGCGTTG GGCGGCGCAC GGCTGGCGGT ACTGCCGGAA
AACTTCGCCG CCATGGGCCG CAAGGACGCC GCAGCCATTG GCCGTGCCGA AGCCTTGGGT
GATGGGCCGA TTCTGCCATG GTTGAAACGC ACCGCCCGCG ACCTCAAGTT ATGGATTGTT
GCCGGTACCT TGCCCTTGCC ACCGGTCGGC CGGCCTGAGT CCAAGGCCCA TGCCTGCTCG
CTGCTGATCG ATGAACACGG CGAGGTGGTG GCGCGTTATG ACAAGCTGCA CTTGTTCGAC
GTGGACGTTG CCGATAATCG CGGCCGCTAC CGTGAATCGG ACGACTACGC CCATGGCGCC
CAAGTGGTGG TGGCCGACAC GCCCGTCGGA CGGCTGGGGC TTAGCGTGTG CTACGACTTG
CGTTTCCCCG AACTGTACAG CGCATTGCGT GCTGCCGGCG CGGAGCTGAT CACTGCGCCG
GCTGCCTTTA CCGCCGTGAC CGGCGCGGCA CATTGGGAGG TGCTGGTGCG CGCCCGGGCC
ATCGAAACCC AGTGCTACCT GCTGGCTGCG GCGCAGGGAG GCACCCACCC AGGCCCACGG
GAAACCCATG GCCATGCGGC GATCGTCGAC CCTTGGGGGC GCATCGTCGC AGAACAGGCG
CAAGGCGAAG CGGTACTGCT TGCCGAGCGC GACATTGAAG AACAAGCGTC CATTCGGGCG
CGCATGCCGG TGGTTTCGCA CCGGCGCTTT TTTTCGCAGG GCGCGTTGCG GCCTGCGCAC
ACCTCGGAGT GA
 
Protein sequence
MKAAVIQMVS QDDVLANLQR AGALLEQAAL GGARLAVLPE NFAAMGRKDA AAIGRAEALG 
DGPILPWLKR TARDLKLWIV AGTLPLPPVG RPESKAHACS LLIDEHGEVV ARYDKLHLFD
VDVADNRGRY RESDDYAHGA QVVVADTPVG RLGLSVCYDL RFPELYSALR AAGAELITAP
AAFTAVTGAA HWEVLVRARA IETQCYLLAA AQGGTHPGPR ETHGHAAIVD PWGRIVAEQA
QGEAVLLAER DIEEQASIRA RMPVVSHRRF FSQGALRPAH TSE