Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0946 |
Symbol | |
ID | 5868706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1087044 |
End bp | 1087895 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641546047 |
Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
Protein accession | YP_001667192 |
Protein GI | 167031961 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.552016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCAG CGGTAATCCA GATGGTCAGC CAGGATGACG TGCTGGCCAA CCTGCAGCGT GCCGGTGCCC TGCTGGAGCA GGCAGCGTTG GGCGGCGCAC GGCTGGCGGT ACTGCCGGAA AACTTCGCCG CCATGGGCCG CAAGGACGCC GCAGCCATTG GCCGTGCCGA AGCCTTGGGT GATGGGCCGA TTCTGCCATG GTTGAAACGC ACCGCCCGCG ACCTCAAGTT ATGGATTGTT GCCGGTACCT TGCCCTTGCC ACCGGTCGGC CGGCCTGAGT CCAAGGCCCA TGCCTGCTCG CTGCTGATCG ATGAACACGG CGAGGTGGTG GCGCGTTATG ACAAGCTGCA CTTGTTCGAC GTGGACGTTG CCGATAATCG CGGCCGCTAC CGTGAATCGG ACGACTACGC CCATGGCGCC CAAGTGGTGG TGGCCGACAC GCCCGTCGGA CGGCTGGGGC TTAGCGTGTG CTACGACTTG CGTTTCCCCG AACTGTACAG CGCATTGCGT GCTGCCGGCG CGGAGCTGAT CACTGCGCCG GCTGCCTTTA CCGCCGTGAC CGGCGCGGCA CATTGGGAGG TGCTGGTGCG CGCCCGGGCC ATCGAAACCC AGTGCTACCT GCTGGCTGCG GCGCAGGGAG GCACCCACCC AGGCCCACGG GAAACCCATG GCCATGCGGC GATCGTCGAC CCTTGGGGGC GCATCGTCGC AGAACAGGCG CAAGGCGAAG CGGTACTGCT TGCCGAGCGC GACATTGAAG AACAAGCGTC CATTCGGGCG CGCATGCCGG TGGTTTCGCA CCGGCGCTTT TTTTCGCAGG GCGCGTTGCG GCCTGCGCAC ACCTCGGAGT GA
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Protein sequence | MKAAVIQMVS QDDVLANLQR AGALLEQAAL GGARLAVLPE NFAAMGRKDA AAIGRAEALG DGPILPWLKR TARDLKLWIV AGTLPLPPVG RPESKAHACS LLIDEHGEVV ARYDKLHLFD VDVADNRGRY RESDDYAHGA QVVVADTPVG RLGLSVCYDL RFPELYSALR AAGAELITAP AAFTAVTGAA HWEVLVRARA IETQCYLLAA AQGGTHPGPR ETHGHAAIVD PWGRIVAEQA QGEAVLLAER DIEEQASIRA RMPVVSHRRF FSQGALRPAH TSE
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