| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0944 |
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| Symbol | |
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| ID | 5868704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 1081674 |
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| End bp | 1083131 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641546045 |
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| Product | ribonuclease |
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| Protein accession | YP_001667190 |
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| Protein GI | 167031959 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAG AGATCCTGAT CAACATCACG CCGATGGAGT CACGTGTGGC GGTGGTGGAA
AACGGGGTGC TGCAGGAAGT GCACGTCGAG CGCACCCAGC GCCGTGGCAT CGTCGGCAAT
ATCTACAAGG GCAAGGTGGT ACGCGTGCTG CCGGGCATGC AGGCGGCCTT CGTCGACATC
GGCCTGGAGC GCGCAGCGTT CATCCATGCC TCGGAAATTT CCCAGCGCGA AGGTTCGGCG
GTAGAGAACA TCACCGCACT GGTACACGAA GGCCAGGCCC TTGTGGTGCA GGTGACCAAG
GACCCGATCG GCACCAAGGG TGCACGCCTG ACCACTCAGC TGTCGATCCC GTCGCGCTAC
CTGGTGTACA TGCCGCGCAG CAGCCATGTC GGTATTTCGC TGAAAATCGA GGACGAAGCC
GAGCGCGAGC GCCTCAAGCA GGTGGTCAGC GATTGCATGG ACAGCGAGAA CATCAAGGAT
GCCGGAGGGT TCATCCTGCG CACCGCAGCC GAGGGCGCGC GTGCCGAAGA AATCTTGCAG
GACATCCGCT ACCTGCGCCG CCTGTGGGAG CAGATTGGCA CCCAGATCAA GACCTGCGGC
GCGCCCACGG TCATCTACGA GGACCTGGGC CTGGCCCTGC GTACCCTGCG TGACCTGGTC
AACCCGAAGA TCGAAAAGAT CCGCATCGAC TCGCGGGAAA CCTTCCAGAA AACCACGCAG
TTCGTCGGCG AGCTGATGCC GGAAATCGCC GACCGCCTCG AACACTACCC AGGCGAGCGG
CCTATCTTTG ACCTGTACGG CGTCGAAGAC GAGATCCAGC GTGCCCTGGA ACGCAAGGTG
CCGCTGAAGT CCGGCGGCTA CCTGGTGGTC GACCCGGCCG AAGCGATGAC CACCATCGAC
GTCAACACCG GGGCGTTCGT GGGCCATCGC AACCTCGAAG AAACCATCTT CAAGACCAAC
CTCGAAGCCG CCACCGCCAT CGCCCGGCAA CTGCGCCTGC GCAACATTGG CGGCATCATC
ATCATCGACT TCATCGACAT GGAAGACGAA GAGCACCAGC GCCAAGTGCT GCGGACCCTG
GAAAAGCAGC TGGAGCGCGA CCACGCCAAG ACCAACATCA TCGGCATCAC CGAGCTGGGC
CTGGTGCAGA TGACCCGCAA GCGTACGCGG GAAAGCCTGG AGCAGGTGCT GTGCGAGCCG
TGCCTGGCCT GCCAGGGGCG CGGCAAGCTG AAGACTCCCG AGACCATCTG TTACGAAATC
TTCCGCGAGA TCCTGCGCGA GGCCCGTGCC TATCAGGCCG AGGGTTACCG TGTGCTGGCC
AACCAAAAGG TGGTCGATCG CCTGCTGGAT GAAGAATCGG GCAACGTGGC GGAACTGGAA
GCCTTCATCG GCCGAACCAT TCGCTTCCAG GTCGAGTCGA TGTATTCGCA GGAACAATAC
GACGTGGTGC TGCTCTGA
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| Protein sequence | MSEEILINIT PMESRVAVVE NGVLQEVHVE RTQRRGIVGN IYKGKVVRVL PGMQAAFVDI
GLERAAFIHA SEISQREGSA VENITALVHE GQALVVQVTK DPIGTKGARL TTQLSIPSRY
LVYMPRSSHV GISLKIEDEA ERERLKQVVS DCMDSENIKD AGGFILRTAA EGARAEEILQ
DIRYLRRLWE QIGTQIKTCG APTVIYEDLG LALRTLRDLV NPKIEKIRID SRETFQKTTQ
FVGELMPEIA DRLEHYPGER PIFDLYGVED EIQRALERKV PLKSGGYLVV DPAEAMTTID
VNTGAFVGHR NLEETIFKTN LEAATAIARQ LRLRNIGGII IIDFIDMEDE EHQRQVLRTL
EKQLERDHAK TNIIGITELG LVQMTRKRTR ESLEQVLCEP CLACQGRGKL KTPETICYEI
FREILREARA YQAEGYRVLA NQKVVDRLLD EESGNVAELE AFIGRTIRFQ VESMYSQEQY
DVVLL
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