| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0934 |
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| Symbol | |
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| ID | 5868694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1072819 |
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| End bp | 1073193 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641546035 |
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| Product | carboxymuconolactone decarboxylase |
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| Protein accession | YP_001667180 |
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| Protein GI | 167031949 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR02425] 4-carboxymuconolactone decarboxylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGATA GCAACAAGAC CGGCGAGCAA ATTCGCCGTC AGGTAATGGG CGATGCATTC
GTCGATCGCG CACTGGGCAA TGCCACCGAC TTCACCCAGC CGCTGCAGGA CTTCGTCAAT
GAACATGCCT GGGGCAGTGT GTGGGCGCGT GACGGACTAC CTCTGAAGAC TCGCAGCCTG
ATTACCTTGG CCACGCTGAC GGCACTGAAG TGCCCGCAGG AGCTCAAGGG GCATGTGCGC
GGGGCGTTGA ACAATGGCTG TACGGTCGAG GAAATCCGCG AGGCGTTGCT GCATTGTGCA
GTGTATGCGG GCGTGCCGGC GGCGATTGAT GCCTTCAGGG CCGCGCAGGA AGTGATCGAC
AGCTACCAAG GCTGA
|
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| Protein sequence | MADSNKTGEQ IRRQVMGDAF VDRALGNATD FTQPLQDFVN EHAWGSVWAR DGLPLKTRSL
ITLATLTALK CPQELKGHVR GALNNGCTVE EIREALLHCA VYAGVPAAID AFRAAQEVID
SYQG
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