| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0928 |
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| Symbol | |
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| ID | 5868688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1065554 |
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| End bp | 1067179 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641546029 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001667174 |
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| Protein GI | 167031943 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAC ACGCAGTCAT TCCGTTCCTG CTTGGCGCAG GCTTGCTCAC CGGTGCACCG
TCGGCCTTGG CCGCGTCCAA CCTGGTGTTC TGCTCCGAGG GCAGCCCGGC CGGTTTCGAC
CCGGGGCAGT ACACCACCGG GACCGACTTC GACGCCTCGG CCGAGACCGT GTTCAACCGC
CTGACCCAGT TCGAACGTGG TGGCACGGCC GTCATCCCGG GCCTGGCGAC CAAATGGGAA
GTGTCCGACG ACGGCAAGAC CTACACCTTC CACCTGCGCG AAGGGGTCAA GTTCCATACC
ACCGACTACT TCAAGCCCAG CCGCCCGTTC AACGCCGACG ACGTGTTGTT CACCTTCAAC
CGCATGCTCG ACAAGGAGCA ACCGTTCCGC AAGGCTTACC CCACCGAGTT CCCGTACTTC
ACCGACATGG GCATGGACAA GAATATCGCC AAAGTGGAGA AGCTCGACGA GCACACGGTG
AAGTTCACCC TCAACGAAGT CGATGCCGCG TTCATCCAGA ACCTGGCCAT GAGCTTCGCC
TCGATTCAGT CCGCCGAATA CGCCGACCAG CTGCTCAAGG ACGGCAAGGC CGCCGACATC
AACCAGAAGC CTATCGGCAC TGGCCCGTTC GTGTTCAGCA AGTACCAGAA GGACGCGCAG
ATCCGCTTCA AGGGCAACAA GGACTACTGG CAACCCGATG ACGTGAAGAT CGACAACCTG
ATCTTTGCCA TCACCACCGA TGCCTCGGTG CGCATGCAGA AGCTGAAAAA GAACGAGTGC
CAGGTCACTT TGTTCCCCCG CCCGGCCGAC ATCGAGCCAC TAAAGAAAGA CCCCAAGCTA
AAAATGCCTG ACCAGGCCGG TTTCAACCTT GGCTACATCG CCTACAACGT GATGGACAAG
ATCAAGGGCA GCAACGACGC CAACCCCATG GCCCAGTTGA AAGTGCGCCA GGCGCTGGAC
ATGGCCGTGG ACAAGAAAAA GATCATCGAG TCGGTCTACC AAGGTGCCGG CCAGCTGGCA
GTCAATGCCA TGCCACCTAC GCAATGGTCC TATGACACCA GCATCAAGGA CGCCCCGTTC
GACCCCGAAA AAGCCAAGCA ACTGCTCAAG GAGGCTGGCA TCAAGGAAGG CACCGAAATC
ACCCTGTGGG CCATGCCGGT GCAACGCCCG TACAACCCCA ATGCCAAGCT GATGGCCGAA
ATGCTCCAGT CCGACTGGGC CAAGATCGGT ATCAAGGCGA AGATCGTCAG CTACGAATGG
GGCGAGTACA TCAAACGCTC CAAAGGCGGC GAACAGGGCG CCATGCTGAT TGGCTGGAGC
GGTGACAACG GTGACCCGGA CAACTGGCTG GGCACCCTCT ACGGCTGCGA TGCCGTGGAT
GGCAACAACT TCTCCAAGTG GTGCTACAAG CCCTACGACG ACCTGATCAA GCAGGCCAAG
GCCACTTCCG ACCAGGCCAA GCGCACCGAG CTGTACCAGA AGGCGCAGCA CATCCTCAAG
GAGCAGGTAC CGATCACACC GATCGCTCAC TCCACCGTCT ACCAGCCCAT GAGCGCCAAA
GTGAAGGATT ACAAGATCAG CCCATTCGGA CTGAACTCCT TCTACGGCGT CAGCGTGGAC
AAGTAG
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| Protein sequence | MLKHAVIPFL LGAGLLTGAP SALAASNLVF CSEGSPAGFD PGQYTTGTDF DASAETVFNR
LTQFERGGTA VIPGLATKWE VSDDGKTYTF HLREGVKFHT TDYFKPSRPF NADDVLFTFN
RMLDKEQPFR KAYPTEFPYF TDMGMDKNIA KVEKLDEHTV KFTLNEVDAA FIQNLAMSFA
SIQSAEYADQ LLKDGKAADI NQKPIGTGPF VFSKYQKDAQ IRFKGNKDYW QPDDVKIDNL
IFAITTDASV RMQKLKKNEC QVTLFPRPAD IEPLKKDPKL KMPDQAGFNL GYIAYNVMDK
IKGSNDANPM AQLKVRQALD MAVDKKKIIE SVYQGAGQLA VNAMPPTQWS YDTSIKDAPF
DPEKAKQLLK EAGIKEGTEI TLWAMPVQRP YNPNAKLMAE MLQSDWAKIG IKAKIVSYEW
GEYIKRSKGG EQGAMLIGWS GDNGDPDNWL GTLYGCDAVD GNNFSKWCYK PYDDLIKQAK
ATSDQAKRTE LYQKAQHILK EQVPITPIAH STVYQPMSAK VKDYKISPFG LNSFYGVSVD
K
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