| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0923 |
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| Symbol | |
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| ID | 5868683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1058477 |
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| End bp | 1059403 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641546024 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001667169 |
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| Protein GI | 167031938 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.848897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAGCC CGATTGCAAA ATCCGTGTCG CCGGCCAGCC CGGTGGACCA GAGCCTGCTC
TACCCCTCGC CGTACAAAGA ATTCTGGCAA GCCTTCGCGC GCAACAAGGG CGCGGTGATG
GGCCTGGCCT TCATGTGCCT GGTGGTGTTC TGCGCCCTGT TCGCGCCGTG GGTCGCCCCG
CATGACCCGA GCGAGCAGTA CCGCGACTTC CTGCTGACCC CGCCGGTGTG GCTGGAAGGC
GGCACCTGGC AGTTCATCCT CGGCACCGAC GAACTTGGCC GCGACCTGCT TTCGCGGCTG
ATTCAGGGTG CACGGTTGTC GCTGCTGATC GGCCTGTCGT CGGTCGTGAT GTCGCTGATC
CCTGGCATTT TCCTCGGCCT GCTGGCCGGT TTCTTCCCGC AACTGCTCGG CCCATCGATC
ATGCGCCTGA TGGATGTGAT GCTGGCGTTG CCGTCGCTGC TGCTGGCGGT GGCCATCGTC
GCTATCCTCG GCCCTGGCCT GATCAATACG GTGATCGCCA TCGCCATCGT GTCCCTGCCC
TCCTACGTGC GCCTGACCCG CGCCGCCGTG ATGGGCGAGC TGAACCGCGA CTACGTCACC
GCCGCACGCC TGGCCGGTGC CAGCCTGCCA CGGCTGATGT TCGTCACCGT GCTGCCCAAC
TGCATGGCGC CACTGATCGT GCAGGCCACC CTCAGTTTCT CCTCGGCCAT CCTCGACGCC
GCCGCGCTGG GCTTTCTTGG CCTCGGCGTA CAACCGCCAA CCCCCGAGTG GGGCACCATG
CTGGCTTCGG CCCGAGACTA CATCGAGCGT GCCTGGTGGG TGGTCAGCCT GCCCGGCCTG
ACCATTCTGC TCAGTGTGCT GGCAATCAAC CTGATGGGCG ACGGGCTGCG CGATGCGCTG
GACCCTAAAC TCAAGAACGC CGCCTGA
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| Protein sequence | MTSPIAKSVS PASPVDQSLL YPSPYKEFWQ AFARNKGAVM GLAFMCLVVF CALFAPWVAP
HDPSEQYRDF LLTPPVWLEG GTWQFILGTD ELGRDLLSRL IQGARLSLLI GLSSVVMSLI
PGIFLGLLAG FFPQLLGPSI MRLMDVMLAL PSLLLAVAIV AILGPGLINT VIAIAIVSLP
SYVRLTRAAV MGELNRDYVT AARLAGASLP RLMFVTVLPN CMAPLIVQAT LSFSSAILDA
AALGFLGLGV QPPTPEWGTM LASARDYIER AWWVVSLPGL TILLSVLAIN LMGDGLRDAL
DPKLKNAA
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