Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0918 |
Symbol | |
ID | 5868678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 1053588 |
End bp | 1053929 |
Gene Length | 342 bp |
Protein Length | 113 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641546019 |
Product | protein of unknown function DUF861 cupin_3 |
Protein accession | YP_001667164 |
Protein GI | 167031933 |
COG category | [R] General function prediction only |
COG ID | [COG3450] Predicted enzyme of the cupin superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.0754701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.435909 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCA CCCAGTTCAA GAACACCGCC AGCGCCGTGC TGGACAGTTC CAACCCCGTC GCGGTACCGC TCGGCGAGCC CATTGCAGTG GCCTCGGTCA CCTGCGTGGA GCGCAGCGAT GGCGTCGAAA CAGGCATCTG GGAATGCACC CCCGGGCGCT GGCGGCGGCA GATCGTGCAG CAGGAGTTCT GCCATTTCAT CAAGGGCCGC TGCACCTTCA CCCCCGACGG TGGCGAGACC CTCTACATAG AAGCCGGAGA CGCACTGATG CTACCGGCCA ACAGCACCGG CATCTGGGAC ATCCAGGAGA CCGTGCGCAA GACCTACGTA CTAATTTTCT GA
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Protein sequence | MSITQFKNTA SAVLDSSNPV AVPLGEPIAV ASVTCVERSD GVETGIWECT PGRWRRQIVQ QEFCHFIKGR CTFTPDGGET LYIEAGDALM LPANSTGIWD IQETVRKTYV LIF
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