Gene PputGB1_0918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0918 
Symbol 
ID5868678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp1053588 
End bp1053929 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content63% 
IMG OID641546019 
Productprotein of unknown function DUF861 cupin_3 
Protein accessionYP_001667164 
Protein GI167031933 
COG category[R] General function prediction only 
COG ID[COG3450] Predicted enzyme of the cupin superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0754701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.435909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA CCCAGTTCAA GAACACCGCC AGCGCCGTGC TGGACAGTTC CAACCCCGTC 
GCGGTACCGC TCGGCGAGCC CATTGCAGTG GCCTCGGTCA CCTGCGTGGA GCGCAGCGAT
GGCGTCGAAA CAGGCATCTG GGAATGCACC CCCGGGCGCT GGCGGCGGCA GATCGTGCAG
CAGGAGTTCT GCCATTTCAT CAAGGGCCGC TGCACCTTCA CCCCCGACGG TGGCGAGACC
CTCTACATAG AAGCCGGAGA CGCACTGATG CTACCGGCCA ACAGCACCGG CATCTGGGAC
ATCCAGGAGA CCGTGCGCAA GACCTACGTA CTAATTTTCT GA
 
Protein sequence
MSITQFKNTA SAVLDSSNPV AVPLGEPIAV ASVTCVERSD GVETGIWECT PGRWRRQIVQ 
QEFCHFIKGR CTFTPDGGET LYIEAGDALM LPANSTGIWD IQETVRKTYV LIF