| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0908 |
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| Symbol | |
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| ID | 5868668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 1041051 |
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| End bp | 1042214 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641546009 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_001667154 |
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| Protein GI | 167031923 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0226551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCC AGGTCGAAGA CTATTTCGCG CGTGACACCT TCCAGAAAAT GAAGGCGTTC
GCCGACAAGC AGGAAACCCC GTTCGTACTC ATCGATACCC AGATGATCAG CCAGGCCTAT
GACGACCTGC GCGCCGGTTT CGAATTCGCC AAGGTCTACT ACGCGGTCAA GGCCAACCCG
GCCGTCGAGA TCATCGACCT GCTCAAAGAG AAAGGTTCGA GCTTCGACAT CGCCTCGATC
TACGAACTGG ACAAGGTGAT GGACCGTGGC GTCAGCGCCG ACCGCATCAG CTACGGCAAC
ACCATCAAGA AGTCCAAGGA CATCCGCTAC TTCTACGAGA AGGGCGTGCG TCTGTACGCC
ACCGACTCCG AAGCCGACCT GCGCAACATT GCCAAGGCCG CACCGGGCTC GAAAGTGTAC
GTGCGTATCC TGACCGAAGG CTCCACCACT GCCGACTGGC CGCTGTCCCG CAAGTTCGGC
TGCCAGACCG ACATGGCAAT GGACCTGCTG ATCCTCGCCC GCGACCTGGG CCTGGTACCT
TACGGCATTT CCTTCCATGT GGGCTCGCAG CAGCGTGACA TCAGCGTGTG GGACGCCGCC
ATCGCCAAGG TCAAGGTGAT CTTCGAGCGC CTGAAAGAAG AAGACGGCAT CGAGCTGAAG
CTGATCAACA TGGGTGGCGG CTTCCCGGCC AACTACATCA CCCGCACCAA CAGCCTGGAA
ACCTACGCTG AAGAAATCAT TCGCTTCCTC AAGGAAGACT TCGGTGACGA GCTGCCGGAA
ATCATCCTGG AGCCAGGCCG TTCGCTGATC GCCAACGCCG GCATCCTGGT CAGCGAAGTG
GTGCTGGTGG CGCGCAAGTC GCGTACCGCC GTCGAGCGCT GGATCTACAC CGACGTGGGC
AAGTTCTCCG GCCTGATCGA AACCATGGAC GAAGCCATCA AGTTCCCGAT CTGGACCGAG
AAAAAAGGCG AAGCCGAAGA AGTGGTCATC GCCGGCCCGA CCTGCGACAG CGCCGACATC
ATGTACGAGA ACTACAAGTA CGGCCTGCCG TTGAACCTGG CCATCGGTGA CCGCCTGTAC
TGGCTGTCGA CCGGCGCCTA CACCACCAGC TACAGCGCAG TGGAATTCAA CGGTTTCCCG
CCGCTGAAGG CTTACTACCT GTAA
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| Protein sequence | MSIQVEDYFA RDTFQKMKAF ADKQETPFVL IDTQMISQAY DDLRAGFEFA KVYYAVKANP
AVEIIDLLKE KGSSFDIASI YELDKVMDRG VSADRISYGN TIKKSKDIRY FYEKGVRLYA
TDSEADLRNI AKAAPGSKVY VRILTEGSTT ADWPLSRKFG CQTDMAMDLL ILARDLGLVP
YGISFHVGSQ QRDISVWDAA IAKVKVIFER LKEEDGIELK LINMGGGFPA NYITRTNSLE
TYAEEIIRFL KEDFGDELPE IILEPGRSLI ANAGILVSEV VLVARKSRTA VERWIYTDVG
KFSGLIETMD EAIKFPIWTE KKGEAEEVVI AGPTCDSADI MYENYKYGLP LNLAIGDRLY
WLSTGAYTTS YSAVEFNGFP PLKAYYL
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