| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0905 |
|---|
| Symbol | |
|---|
| ID | 5868665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 1038935 |
|---|
| End bp | 1039615 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641546006 |
|---|
| Product | putative hydroxylase |
|---|
| Protein accession | YP_001667151 |
|---|
| Protein GI | 167031920 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3128] Uncharacterized iron-regulated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0497199 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTTC ACATCCCAGG CCTGTTCGAC GCTGATGAAC TGGCCCGTAT CCGCGAGGCG
CTGGAGCAGG CCGACTGGGC CGATGGCAAG GTCACGGCTG GTTATCAGTC GGCCAAGGCC
AAACACAACC TGCAGTTGCC GGAAGGGCAC GCGCTGGCCA AGGAGATCGG CTCTGCGCTG
ATCGACCGCT TGTGGAAAAC CCCGCGCTTC ATGTCTGCAG CGTTGCCGCA CAAGGTGTTC
CCGCCGCTGA TCAATTGCTA CCGCGAAGGT GGCAACTTCG GTTTCCACAT CGACAACGCC
CTGCGCCAGC CCAAGGGCAG CCCGGAGCGG GTGCGTACCG ACCTGTCTTC CACGCTGTTC
CTCAGCGACC CAGACAGCTA CGACGGCGGT GAGCTGGTGA TTCAGGACAC CTATGGCGTG
CAGCAGGTCA AGCTGGCCGC CGGTGACCTG GTGCTGTACC CCGGCACCAG CCTGCACAAG
GTCAACCCGG TGACCCGTGG GCAGCGCTAT GCCGCATTCT TCTGGGCCCA GAGCCTGGTG
CGCGAGGACA GCCAGCGGGC ACTGCTGTTC GAGATGGACA ACGCCATCCA GCAACTGACT
GCCGATGTGC CAGACCATCC TTCGCTGCTG CAACTGACGG GCACCTACCA CAACCTGCTG
CGCCGCTGGG CTGAGGTCTG A
|
|---|
| Protein sequence | MLLHIPGLFD ADELARIREA LEQADWADGK VTAGYQSAKA KHNLQLPEGH ALAKEIGSAL
IDRLWKTPRF MSAALPHKVF PPLINCYREG GNFGFHIDNA LRQPKGSPER VRTDLSSTLF
LSDPDSYDGG ELVIQDTYGV QQVKLAAGDL VLYPGTSLHK VNPVTRGQRY AAFFWAQSLV
REDSQRALLF EMDNAIQQLT ADVPDHPSLL QLTGTYHNLL RRWAEV
|
|---|
| |