Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0893 |
Symbol | |
ID | 5868653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 1022839 |
End bp | 1023984 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641545994 |
Product | radical SAM protein |
Protein accession | YP_001667139 |
Protein GI | 167031908 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000000355307 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGACAT CTACTGGCAA AATCAACCTG TTGGGCCTGA CCCAGCCGGA AATGGAACAA TTCTTCGACT CTATCGGGGA GAAGCGCTTC CGTGCCGGCC AGGTGATGAA ATGGATTCAC CATTTTGGCG TGTCCGACTT TGCGGCCATG ACCAACGTAG GCAAGGTCTT GCGCGAAAAG CTCGAGGCCG TTGCCGAGAT TCGCCCACCG GAAGTGGTCA GTGAAGACAT TTCCGCCGAC GGCACCCGCA AATGGGTGAT CCGCGTTGCC TCCGGCAGCT GCGTCGAGAC CGTCTACATT CCTACCGACG ACCGCGGTAC CCTGTGCGTA TCGTCGCAAG CCGGCTGTGC CCTGGACTGC AGTTTCTGCT CCACCGGCAA GCAAGGCTTC AACAGCAACC TCACCGCCGC CGAAGTGATC GGCCAGGTGT GGCTTGCCAA CAAATCCTTC GGGACCGTCC CTGCCAAAGT CGACCGCGCG ATTACCAACG TGGTGATGAT GGGCATGGGC GAGCCCTTGC TGAACTTCGA CAACGTCATC GCCGCCATGA AAATCATGAT GGATGACCTT GGCTATGGCA TTTCCAAGCG TCGCGTCACG CTGTCCACCT CGGGCGTGGT ACCGATGATC GACGAACTGG CCAAGCACAT CGACGTGTCG CTGGCCCTTT CGCTGCACGC GCCGAACGAC GAACTGCGCA ACAAGCTGGT TCCGATCAAC AAGAAGTACC CGCTGAAGGT GCTGCTGGAA TCGTGCATGG GCTACATGTC TACCTTGGGC GGCAAGCGCG TGCTCACCGT CGAGTACACC TTGCTCAAGG ACGTCAATGA CCAGCCTGAG CATGCCGCGC AAATGATCGA GTTGCTGCGC GACGTACCGT GCAAGATCAA CCTGATCCCG TTCAACCCGT TCCCGCATTC GGGCTACGAG CGGCCGAGCA ACAACGCCAT TCGTCGCTTC CAGGACCTGC TGCACCACGG TGGTTTCAAC GTCACCACCC GCACCACCCG TGGCGACGAC ATCGACGCTG CCTGCGGCCA GCTGGTTGGC CAGGTCAACG ACCGTACCCG CCGCAGTGAA CGCTATATCG CTGTTCGCCA GCTTTCCGCA GACGTCGAGC TGCAAGACAG CGCCGCCAGC CACTGA
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Protein sequence | MTTSTGKINL LGLTQPEMEQ FFDSIGEKRF RAGQVMKWIH HFGVSDFAAM TNVGKVLREK LEAVAEIRPP EVVSEDISAD GTRKWVIRVA SGSCVETVYI PTDDRGTLCV SSQAGCALDC SFCSTGKQGF NSNLTAAEVI GQVWLANKSF GTVPAKVDRA ITNVVMMGMG EPLLNFDNVI AAMKIMMDDL GYGISKRRVT LSTSGVVPMI DELAKHIDVS LALSLHAPND ELRNKLVPIN KKYPLKVLLE SCMGYMSTLG GKRVLTVEYT LLKDVNDQPE HAAQMIELLR DVPCKINLIP FNPFPHSGYE RPSNNAIRRF QDLLHHGGFN VTTRTTRGDD IDAACGQLVG QVNDRTRRSE RYIAVRQLSA DVELQDSAAS H
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