| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0836 |
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| Symbol | |
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| ID | 5868595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 948274 |
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| End bp | 948948 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641545936 |
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| Product | two component heavy metal response transcriptional regulator |
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| Protein accession | YP_001667082 |
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| Protein GI | 167031851 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.368612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGTGC TGATCATCGA AGACGAAGAA AAAACCGCCG ACTACCTGCA TCGCGGCCTG
AGCGAACAGG GCTTTACCGT GGACCTGGCG CGGGACGGCA TCGATGGCCT GCACCTGGCC
TTGGAGGGTG ACTACGCGGT AATCGTGCTG GATGTGATGC TGCCAGGCCT GGACGGTTAT
GGCGTGCTGC GCGCCTTGCG CGCTCGCAAG CAAACGCCGG TGATCATGCT GACCGCCCGC
GAGCGTGTCG AAGACCGCAT CCATGGGCTG CGTGAGGGCG CTGACGATTA CCTGGGCAAG
CCGTTCTCGT TCCTCGAACT GGTCGCCCGC CTGCAGGCCC TGACCCGGCG CAGCAGCAGC
CACGAACCGC TGCAGGTGCA GGTGGCAGAC CTGTGGATCG ACCTGATGGC GCGCAAGGCC
ACTCGCGCCG GTCAACGCCT GGATCTGACG GCCAAGGAGT TCTCGTTATT GAGCGTGCTG
GCCCGGCGGC AGGGTGAAAT CCTGTCGAAG ACGGCGATTG CCGAGCTGGT CTGGGACATC
AACTTCGACA GCGATGCCAA CGTCGTGGAA GTGGCAATCA AGCGCCTGCG CGCGAAACTC
GACGGGCCTT TCGACAACAA GTTGCTGCAC ACCATCCGAG GCATGGGCTA TGTCCTGGAA
AACCGTGCGG GGTAA
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| Protein sequence | MRVLIIEDEE KTADYLHRGL SEQGFTVDLA RDGIDGLHLA LEGDYAVIVL DVMLPGLDGY
GVLRALRARK QTPVIMLTAR ERVEDRIHGL REGADDYLGK PFSFLELVAR LQALTRRSSS
HEPLQVQVAD LWIDLMARKA TRAGQRLDLT AKEFSLLSVL ARRQGEILSK TAIAELVWDI
NFDSDANVVE VAIKRLRAKL DGPFDNKLLH TIRGMGYVLE NRAG
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