Gene PputGB1_0827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0827 
Symbol 
ID5868586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp936673 
End bp939525 
Gene Length2853 bp 
Protein Length950 aa 
Translation table11 
GC content68% 
IMG OID641545927 
Productphosphoenolpyruvate-protein phosphotransferase 
Protein accessionYP_001667073 
Protein GI167031842 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria)
[COG4668] Mannitol/fructose-specific phosphotransferase system, IIA domain 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family
[TIGR01417] phosphoenolpyruvate-protein phosphotransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAGC TCGCCAAGGA GCAGATAGCC ATGGGCCAGA CGGCCGCCGA CAAGGCCGAG 
GCATTGAGCC TGCTGGCGGA CCGGCTGGTC GGGGACGGCC TGGTCGCCGA GGGTTACCTG
CAAGGGCTGC AAGCCCGCGA GGTGCAGGGC TCGACGTTCC TTGGCCAGGG CATCGCCATC
CCCCATGGCA CGCCGCAAAC CCGTGATCTG GTGTATACCA CCGGCGTGCG TCTGCTGCAG
TTCCCCGAGG GTGTGGACTG GGGTGACGGG CAAATGGTCT ACCTGGCCAT CGGTATCGCC
GCTCGCTCCG ACGAACACCT GCGCCTGCTG CAGCTGCTCA CCCGCGCCCT GGGCGAGACC
GACCTGGCCG AAGCGCTGCG CCGGGCCAGT TCCGCCGAAG CGCTGCTCAA GCTGCTGCAG
GGCGCACCAC AGGCACTGGC GCTGGATGCG CAGCTGGTTG GCCTGAACCT GCCGGCTGAA
GACTTCGACG AACTGGCCTG GCGCGGTGCC CGCCTGTTGC AACGTGCCGA TTGTGTCGAC
AGCGGCTTTG CCGCCGTATT GCAGCAAGCC GAGCCGCTGC CGCTGGGTGA GGGCCTTTGG
TGGCTGCACA GCGAGCGTCA GGTACGTCAG CCGGGCCTGG CGTTCATCAC CCCCCAGCAG
CCGTTGCGCT ATCGCGACCA ACCGCTCAAC GGTTTGTTCT GCCTGGCGAG CCTAGGCGCC
GCTCACCAAG CCTTGCTCGA GCGCCTGTGT GAAGTGCTGA TTGAAGGCCG TGGGCAGATG
CTCTACCAGG CCACCAGCAG CCGCGCGGTA CTGGAAGTGC TGGGCGGCGA AGCGCCGGCG
GATTGGCCCA GCGCGCGTAT TGTGCTGGCC AACCCTCATG GCCTGCATGC CCGCCCGGCC
AAGGTGCTGG CACAGCTGGC CAAAGGCTTT GAAGGGGAAA TCCGTGTGCG CCTGGTCGAC
AGCGCGCAGC CAGCGGTGTC GCTGAAGAGC CTGAGCAAGC TGCTGAGCCT GGGCGCCCGC
CGTGGTCAGG TGCTGGAGCT GGTCGCCGAG CCTGGCATCG CCGCCGATGC CTTGCCGGTG
CTGCTGGCCG CTATCGAACA AGGCCTTGGC GAAGAGGTTG AACCGCTGCC GCAGAGCGTC
ACGCCCATGG CCGATCACCC ACCCGAAGTG CTGCAGGCCC CAGCCGCCGG CAGCCGTATC
CAGGGTGTGG GCGCAGCGCC CGGCATTGCC AGTGGCCCGG CGCATGTCTG TGTCGAGCGT
GAGTTCGACT ATCCGTTGCG TGGCGAATCC TGCGCCCAGG AGCGGCAGAA GCTGCGCGCA
GCCATCGCCA GTGTGAACAG CGAACTGCAG GCGTTGGTGC TGCGCAGCGA CAAGGCCATT
GGCGAAATTT TCGTCACCCA TCAGGAAATG CTTGCCGACC CGGCCCTGAC CGACGATATC
GAACAGCGCC TGGCCCAGGG CGAAAGCGCT GCGGCCGCCT GGATGGCCGT GATCGAAGCC
GCAGCCCGTC AGCAGGAGTC GTTGCACGAT GCCCTGCTCG CCGAGCGCGC CGCCGACCTG
CGCGACATTG GCCGCCGCGT GCTGGCGCAG CTGTGTGGAG TGCAGGCGCA GGTTGAACCC
GAGCAACCCT ATGTGTTGGT GATGACTGAA GTCGGCCCGT CCGATGTCGC CCGCCTGGAC
CCGAACCGGG TTGCCGGCAT CGTCACCGCC CAAGGCGGTG CCACGGCCCA CAGTGCCATC
GTCGCCCGTG CATTGGGCAT TCCGGCGGTG GTCGGCGCAG GTGCGTCGAT TCTGCTGCTG
GAGAGTGGCA CGCCGCTGCT GCTCGATGGC CAGCGTGGAG TGGTCAGCGT GGCGCCGCCA
GTGGATGAGT TGCAACAGGC GCTGGCCGAG CGCGACCTGC GTGAGCAGCG CCTGCAGGCT
GCCTGGGCCA ACCGCTTCGA GCCAGCCGTC ACCCGTGATG GTCATGCCGT CGAGGTGTTC
GCCAACATTG GCGACAGCAA CGGCATCGCC AAGGTGGTGG AGCAGGGCGC CGAAGGCGTT
GGCCTGCTGC GCACCGAACT GATTTTCATG GCCCACCCTC AAGCGCCGGA CGTGGCCACC
CAGGAGGCCG AGTACCGCCG TGTGCTTGAT GGCCTGGGCG GGCGGCCACT GGTGGTGCGC
ACCCTCGATG TCGGTGGCGA CAAGCCGCTG CCTTACTGGC CCATCGCCGC CGAGGAAAAC
CCGTTCCTTG GTGTACGTGG CGTACGCCTG ACGCTGCAGC GCCCGCAAAT CATGGAAGAC
CAGTTGCGCG CCTTGCTACG GGCCGCCGAC CAGCGACCGC TGCGCATCAT GTTCCCGATG
GTTGGCCAGG TGCACGAATG GCGCGAGGCT CGGGCCATGG TCGAGCGCCT GCGTGCAGAA
ATCCCGGTCG CCGACCTGCA ACTGGGCATC ATGGTCGAGG TGCCTTCGGC GGCCCTGCTG
GCAGCGCAAT TGGCGCGCGA AGTGGACTTC TTCAGCATCG GCACCAATGA CCTGACCCAG
TACACCTTGG CCATCGACCG TGGCCACCCC AGCCTCTCGG CCCAGGCCGA CGGCCTGCAC
CCGGCAGTAT TGACCCTGAT CGACATGACG GTGCGTGCCG CCCATGCCCA AGGCAAGTGG
GTGGGCGTGT GTGGCGAGCT GGCGGCCGAC CCGCAGGCGG TCGCCGTGCT GCTGGGCCTG
GACGTGGACG AGCTCAGTGT ATCCGCGCGC AGCATCGCCG AAGTCAAGGC ACTGGTTCGC
CAGGCCGATC ACCAGACGGC CCGCGCCCTG GCGCGCGAAG CCTTGCAACA GGACAGCGCT
GCGGCAGTTC GCGCGCTGGT GGAGCGTTAC TGA
 
Protein sequence
MLELAKEQIA MGQTAADKAE ALSLLADRLV GDGLVAEGYL QGLQAREVQG STFLGQGIAI 
PHGTPQTRDL VYTTGVRLLQ FPEGVDWGDG QMVYLAIGIA ARSDEHLRLL QLLTRALGET
DLAEALRRAS SAEALLKLLQ GAPQALALDA QLVGLNLPAE DFDELAWRGA RLLQRADCVD
SGFAAVLQQA EPLPLGEGLW WLHSERQVRQ PGLAFITPQQ PLRYRDQPLN GLFCLASLGA
AHQALLERLC EVLIEGRGQM LYQATSSRAV LEVLGGEAPA DWPSARIVLA NPHGLHARPA
KVLAQLAKGF EGEIRVRLVD SAQPAVSLKS LSKLLSLGAR RGQVLELVAE PGIAADALPV
LLAAIEQGLG EEVEPLPQSV TPMADHPPEV LQAPAAGSRI QGVGAAPGIA SGPAHVCVER
EFDYPLRGES CAQERQKLRA AIASVNSELQ ALVLRSDKAI GEIFVTHQEM LADPALTDDI
EQRLAQGESA AAAWMAVIEA AARQQESLHD ALLAERAADL RDIGRRVLAQ LCGVQAQVEP
EQPYVLVMTE VGPSDVARLD PNRVAGIVTA QGGATAHSAI VARALGIPAV VGAGASILLL
ESGTPLLLDG QRGVVSVAPP VDELQQALAE RDLREQRLQA AWANRFEPAV TRDGHAVEVF
ANIGDSNGIA KVVEQGAEGV GLLRTELIFM AHPQAPDVAT QEAEYRRVLD GLGGRPLVVR
TLDVGGDKPL PYWPIAAEEN PFLGVRGVRL TLQRPQIMED QLRALLRAAD QRPLRIMFPM
VGQVHEWREA RAMVERLRAE IPVADLQLGI MVEVPSAALL AAQLAREVDF FSIGTNDLTQ
YTLAIDRGHP SLSAQADGLH PAVLTLIDMT VRAAHAQGKW VGVCGELAAD PQAVAVLLGL
DVDELSVSAR SIAEVKALVR QADHQTARAL AREALQQDSA AAVRALVERY