| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0804 |
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| Symbol | |
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| ID | 5868563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 907686 |
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| End bp | 908651 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641545904 |
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| Product | glycerate dehydrogenase |
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| Protein accession | YP_001667050 |
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| Protein GI | 167031819 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGCC CGCGTCGCGC TGTGTTTCTC GACCACCAAT CCCTAGATCT TGGTGACCTC
GACCTTTCCC CGTTACGAAG CCAGTTCGAT GAGCTCGAAC TGTTCGATGC AACCCGCCCG
GACCAGGTAA GCCAACGCCT GCAGGGCGCC GTCGCGGTGG TCAGCAACAA GGTCATGCTC
GACGCCGCGA CCCTGGCCGC CAACCCGCAG CTCAAGCTGA TTCTGGTGGC CGCCACCGGC
ACCAACAATG TCGACTTGGC AGCAGCCCGC GCCCAAGGCA TCACGGTGTG CAACTGCCAG
GGCTACGGCA CGCCGTCAGT CGCTCAGCAT ACCCTCGCCC TGTTGCTGGC CCTGGCGACG
CGTCTGTGCG ACTACAACCA GGCGGTTGCC GACGGCCAGT GGGCCAAGGC CAGCCAGTTC
TGCCTGCTGG ACTTCCCCAT CGTCGAACTG GAAGGCAAAA CCCTCGGCTT GCTCGGCCAC
GGCGAACTGG GCGGCGCGGT GGCACGGCTG GCCGAAGCCT TCGGCATGCG CGTGCTGAGC
GGACAGATTC CCGGTCGCCC GGAGCGCGCC GACCGGTTGC CGCTTGACGA ACTGCTGCCG
CAAGTCGATG CGCTGACCCT GCACTGCCCG TTGAACGAGC ATACCCGGCA CATGCTCGGC
GCTCGCGAAC TGGGCCTGCT CAAGCGCAAT GCACTGGTTG TCAACACTGC CCGTGGTGGC
CTGATCGACG AACAGGCACT GGCCGACGCC CTGCGCAGTG GCCACCTGGG CGGCGCGGCC
ACCGACGTGC TGAGTGTGGA GCCGCCGGTC AATGGCAACC CATTGCTCCA ACCCGACATC
CCGCGCCTGA TCATCACCCC GCACAGCGCC TGGGGCGCGG TGGAATCGCG CCAGCGCATC
GTTGGCCAGC TCAGCGAAAA CGCCCAGGCC TTCTTCGCTG GTCAGCCACG CCGCGTGGTC
AGCTGA
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| Protein sequence | MPSPRRAVFL DHQSLDLGDL DLSPLRSQFD ELELFDATRP DQVSQRLQGA VAVVSNKVML
DAATLAANPQ LKLILVAATG TNNVDLAAAR AQGITVCNCQ GYGTPSVAQH TLALLLALAT
RLCDYNQAVA DGQWAKASQF CLLDFPIVEL EGKTLGLLGH GELGGAVARL AEAFGMRVLS
GQIPGRPERA DRLPLDELLP QVDALTLHCP LNEHTRHMLG ARELGLLKRN ALVVNTARGG
LIDEQALADA LRSGHLGGAA TDVLSVEPPV NGNPLLQPDI PRLIITPHSA WGAVESRQRI
VGQLSENAQA FFAGQPRRVV S
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