Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0802 |
Symbol | |
ID | 5868561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 905781 |
End bp | 906365 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641545902 |
Product | hypothetical protein |
Protein accession | YP_001667048 |
Protein GI | 167031817 |
COG category | [S] Function unknown |
COG ID | [COG2119] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.901329 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGAAT CTCTGCTGGT CCCCACCGCT ATCGTTGCCC TCGCCGAAAT CGGCGACAAG ACGCAACTGC TCGCGCTCAT TCTCGCGGCT CGCTTTCGCA AACCCTGGCC GATCATCGCC GGCATCATCG CCGCCACCTT GGCCAACCAT GCGGCGGCCG GTGCCGTAGG GGCGTGGTTC GGCAGTTTCT TCAGCGACTC GGCACTGCAC TGGATCCTGG CCGCGAGCTT TACCGCCACA GCGCTGTGGA CCCTGGTACC GGACAAGATG GATGACGACG AGAACCCGGC ACGCCGCTTC GGGCCGTTCC TGACCACGCT GATTGCGTTC TTCCTGGCCG AAATCGGTGA CAAGACCCAG GTTGCCACGG TGATGCTGGC AGCACAGTAC CCGCACCTGA TCATGGTCAT CCTCGGCACC ACCCTGGGCA TGCTGATTGC CAACGTGCCG GTGGTTCTGG CGGGTAACTT CGCGGCAGAC AAACTGCCGT TGACGCTGAT TCGTCGCCTG GCGGCCACGG CGTTCTTCGT CCTGGCGATC GTGGCCGTGT ACTCGGCAAT GAAGGCCAGT GGCTGGGTAG GTTAA
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Protein sequence | MLESLLVPTA IVALAEIGDK TQLLALILAA RFRKPWPIIA GIIAATLANH AAAGAVGAWF GSFFSDSALH WILAASFTAT ALWTLVPDKM DDDENPARRF GPFLTTLIAF FLAEIGDKTQ VATVMLAAQY PHLIMVILGT TLGMLIANVP VVLAGNFAAD KLPLTLIRRL AATAFFVLAI VAVYSAMKAS GWVG
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