Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0783 |
Symbol | |
ID | 5868542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 891324 |
End bp | 892310 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641545883 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001667029 |
Protein GI | 167031798 |
COG category | [R] General function prediction only |
COG ID | [COG3380] Predicted NAD/FAD-dependent oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.918451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGTAC CTATCGCCAT CATCGGGGCC GGTATCGCCG GTTTGTCAGC CGCCCAGGCC TTGCAGAAGG CCGGACAATC CGTGCATTTG TTCGACAAAG GCCACGGCAG TGGCGGGCGC ATGGCCAGCA AGCGCAGCGA GGCTGGCGCA CTCGACCTCG GCGCCCAGTA CTTCACCGCC CGTGACCGGC GCTTTGTCGA TCAGGTGCAA CAATGGGTTG CCGCTGGCTG GGCCGAGCAG TGGAAGCCGC AGCTGTACAA CTACCGTGAT GGCGAACTCA CCCCCTCCCC CGACGAGCAG ACGCGCTGGG TAGGCGTGCC ACGCATGAGT GCGATCACCC GTGGCCTGCT CAAGGACGTG ACGGTCAACT TCGGCTGCCG TATAGCGGAA GTGTTTCGCG GCAAGCAGTA TTGGCACCTG CAGGATACCG AAGGCTGCAG CCATGGCCCC TACAGCCGCG TGGTAATCGC CGTACCGGCC CCGCAGGCCA CACCACTGCT GGCGGCAACC CCCAAATTGG CCGCCGTGGC CGCCGGTGTA CAGATGGAAC CGACCTGGGC CGTCGCCCTG GCCTTCCAGT CACCGTTGGA TACCCCGATG CAAGGCTGCT TCGTGCAGGA CAACCCACTC GACTGGCTGG CCCGCAATCG CAGCAAACCC GGCCGCGACG AGCACCTGGA TACCTGGGTA CTGCACGCCA CCTCGGACTG GAGCCGGCAG CACATCGACC TGTCCAAGGA AGAAGTGATC GAACAGCTGT GGGGCGAATT CGCCGAACTG GTCGGCTGCG TGGTACCGGC GCCCACCTTC GCTCTGGCGC ACCGCTGGCT CTACGCCCGC CCCAGCAGCA ACCATGAATG GGGCGCATTG GCCGATGCCG ATCAGGGCTT GTACGCCTGC GGTGACTGGT GCCTTTCCGG GCGTGTCGAA GGCGCGTGGC TCAGTGGCCA GGAAGCCGCG CGACGTTTGC TCGAACACCT TGAGTGA
|
Protein sequence | MTVPIAIIGA GIAGLSAAQA LQKAGQSVHL FDKGHGSGGR MASKRSEAGA LDLGAQYFTA RDRRFVDQVQ QWVAAGWAEQ WKPQLYNYRD GELTPSPDEQ TRWVGVPRMS AITRGLLKDV TVNFGCRIAE VFRGKQYWHL QDTEGCSHGP YSRVVIAVPA PQATPLLAAT PKLAAVAAGV QMEPTWAVAL AFQSPLDTPM QGCFVQDNPL DWLARNRSKP GRDEHLDTWV LHATSDWSRQ HIDLSKEEVI EQLWGEFAEL VGCVVPAPTF ALAHRWLYAR PSSNHEWGAL ADADQGLYAC GDWCLSGRVE GAWLSGQEAA RRLLEHLE
|
| |