| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0767 |
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| Symbol | ipk |
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| ID | 5868526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 876097 |
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| End bp | 876957 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641545867 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_001667013 |
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| Protein GI | 167031782 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACGC TCACCCTGCC CGCCCCGGCC AAGCTCAACC TGTGGTTGCA CATCATCGGC
CGCCGCGCCG ACGGTTACCA CGAGCTGGAA ACGGTGTTCC AGTTCCTCGA CCACGGCGAC
GAACTGAGCT TCGCCCTGCG TGAAGACGGC GTGATCCGCC TGCACACCGA GATCGAGGCC
GTCCCCCACG ACAGCAACCT GATCGTGCGC GCCGCGCGCA AGCTGCAAGA ACAATCAGGC
ACCGCACTCG GTGCCGATAT CTGGCTGACC AAGGTGCTGC CCATGGGCGG CGGCATCGGC
GGCGGCAGCT CGGATGCCGC CACCACCCTG CTGGCCCTCG CCCACCTGTG GCAACTGGAT
TGGGACGAAG ACCGCCTGGC CGCACTGGGC CTGAGCCTGG GCGCCGACGT GCCGGTGTTC
GTACGCGGCC ATGCGGCGTT CGCCCAAGGT GTGGGCGAGC AACTGACACC GGTCGACCCG
ATCGAGCCCT GGTATGTCGT ACTGGTGCCG CAAGTGTCTG TCAGCACAGT AGAAATTTTT
TCACATCCAC AGTTGACACG TGATTCACTC CCCCTTAAGA TGCGCCCCGT TCCCGAGGGA
AACAGTCGAA ATGACTGCCA ACCGGTGGTA GAGCAGAATT ACCCAGAAGT TCGCAATGCG
TTGAATTCAC TGGGGAAATT CACTGAGGCT CGGCTAACCG GCACTGGAAG TTGTGTGTTT
GGGGCCTTCC CAAGCAAAGC CGAAGCTGAT AAAGTTCTGG CCCTTCTTTC AGCGACCCAA
ACAGGGTTTG TGGCGAAAGG AAGCAATATT TCGATGTTGC ATCGCAAGCT GCAAAGTCTG
GTCAAGAAGT CGAGCGCATA A
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| Protein sequence | MHTLTLPAPA KLNLWLHIIG RRADGYHELE TVFQFLDHGD ELSFALREDG VIRLHTEIEA
VPHDSNLIVR AARKLQEQSG TALGADIWLT KVLPMGGGIG GGSSDAATTL LALAHLWQLD
WDEDRLAALG LSLGADVPVF VRGHAAFAQG VGEQLTPVDP IEPWYVVLVP QVSVSTVEIF
SHPQLTRDSL PLKMRPVPEG NSRNDCQPVV EQNYPEVRNA LNSLGKFTEA RLTGTGSCVF
GAFPSKAEAD KVLALLSATQ TGFVAKGSNI SMLHRKLQSL VKKSSA
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