| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0765 |
|---|
| Symbol | |
|---|
| ID | 5868523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 874298 |
|---|
| End bp | 874891 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641545864 |
|---|
| Product | 50S ribosomal protein L25/general stress protein Ctc |
|---|
| Protein accession | YP_001667011 |
|---|
| Protein GI | 167031780 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
|---|
| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACT TCATCCTGAA CGCCCAAGCG CGTACTGACC TGGGGAAAGG TGCGAGCCGC
CGCCTGCGTC ACGCCGCCAG CATCCCTGCT GTTGTTTACG GTGGCGATAA AGAAGCCCAA
TCCCTGACCA TCGTGGCCAA GGAAATCGCC AAACTGTTCG AAAACGAAGC TGCCTACAGC
CACGTTATCG AACTGAACGT CGACGGCGCC AAGCAGAACG TCGTGGTCAA GGCCATGCAG
CGCCACCCAG CCAAAGGCTT CATCATGCAC GCCGACTTCG TTCGCGTCGT TGCTGGCCAG
AAGCTGACTG CCAAGGTTCC GGTTCACTTC ATCGGTGAAG AAGCCCCGGT CAAGAAAGGC
GGCGAGATCT CGCACGTTGT TTCCGAGATC GAAGTTTCCT GCGAAGCCAA AGACCTGCCT
GAGTTCATCG AAGTTGACCT GGCCAACGCC GAAGTCGGCA CCATCATCCA CCTGTCGGAC
CTGAAAGCTC CGAAAGGCGT AGAGTTCGTC GCTCTGGCCC ACGGTGATGA CAAAGCTGTT
GCCAACGTTC ACGCTCCACG CGTTGCTCCA GAAGCAGAAG GCGCTGCCGA GTAA
|
|---|
| Protein sequence | MTDFILNAQA RTDLGKGASR RLRHAASIPA VVYGGDKEAQ SLTIVAKEIA KLFENEAAYS
HVIELNVDGA KQNVVVKAMQ RHPAKGFIMH ADFVRVVAGQ KLTAKVPVHF IGEEAPVKKG
GEISHVVSEI EVSCEAKDLP EFIEVDLANA EVGTIIHLSD LKAPKGVEFV ALAHGDDKAV
ANVHAPRVAP EAEGAAE
|
|---|
| |