| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0756 |
|---|
| Symbol | |
|---|
| ID | 5868514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 861016 |
|---|
| End bp | 862728 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641545855 |
|---|
| Product | sulfate transporter |
|---|
| Protein accession | YP_001667002 |
|---|
| Protein GI | 167031771 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.229837 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACA CCACACGCTT CGACTGGCAA CGCTGGCTGC CCGGCCTGGT CACCCTGCTC
CACTACAAAG CGGCCTGGTT ACCCAAGGAC ATCGCCGCCG GCCTGGTGCT CACCACCATG
CTGGTACCCG TGGGCATCGC CTACGCCGAA GCGTCCGGCG TCCCCGGTAT CTATGGGCTG
TACGCCACCA TCATCCCGCT GCTGGCCTAT GCCCTGTTCG GCCCCAGCCG CATCCTGGTG
CTGGGGCCGG ACTCGGCGCT GGCCGCGCCG ATCCTGGCAG TGGTGGTGCA GTACGCTGCC
AGCGACCCGC AGCGGGCGAT CGCAATCGCC AGCATGATGG CGCTGGTCGC CGGGGCGTTC
TGTGTGGTTG CCGGGCTGCT GCGCCTGGGC TTTATCACCG AGCTGCTGTC CAAGCCGATC
CGCTACGGCT ACATGAACGG CATCGCCCTC ACCGTATTGA TCAGCCAGTT GCCCAAGCTG
TTCGGCCTCA AAGTCGACAG TGAGGGGCCC TTGCGCGACC TTTGGCACTT GGGCCAGGCG
CTGTTCGCCG GCCAGGGGCA CTGGCCAAGC TTCGTCGTGG GCGCCGGTAG CCTGGTGCTG
ATCCTGCTGC TCAAACCGTT CAAGCGCCTG CCAGGCATCT TGATCGCCGT GGTGTTGGCG
ACGCTGGCAG TAAGCCTGTT CAACCTCGAC CAAATGGGCG TCAAGGTACT CGGGCAATTG
CCCCAGGGCC TGCCCAGCTT CGTCTTCCCC TGGGTAACCG ACATCGACCT GGTCGAAGTG
ATACTGGGCG GGGTTGCCGT GGCGCTTGTG TCGTTCGCCG ACACCAGCGT ACTGTCACGC
TCTTATGCCG CACGCCTGAA AATGCCGGTA AACCCCAACC AGGAGATGTT CGGCCTGGGC
GTGGCCAACC TGGCTTCGGG GCTGTTCCAA GGCATCCCGA TCAGCAGCAG TTCGTCACGC
ACACCGGTGG CCGAAGCCGC CGGCTCGCAG ACCCAGCTCA CCGGCATCAT CGGCGCGCTG
GCAGTAACCC TGTTGCTGCT GGTAGCGCCC AATCTGATGC AGCACCTGCC CAACAGCGCG
CTGGCTGCGG TGGTCATTGC CGCTGCGCTG GGGCTGTTCG AGTTCGCCGA CCTCAAGCGT
ATTTTCCGCA TGCAGCAGTG GGAATTCTGG CTGTCGATCA CCTGCTTTGT CGGTGTGGCG
GTGTTCGGCG CCATTCCCGG TATCTGCATT GCCGTGGCGG TGTCGGTGAT CGAGTTCCTG
TGGGACGGCT GGCGGCCGCA CCACGCGGTG CTCGGGCGTG CCGATGGGCT GCGTGGTTAC
CATGACGTGC AGCGTTATCC ACAGGCCCGG CGTATTCCGG GGCTGGTGCT GCTGCGCTGG
GACGCGCCGC TGTTCTTTGC CAATGCCGAG CAGTTCCAGA GCACAGTGAT GGCGGCGGTG
GACGCGTCGC CGACGCCGGT GCAGCGGCTG ATAATTGCGG CGGAACCGGT GACCAGTATC
GACATCACCT CGGCGGACAT GCTGGCCGAG CTGGACCGAG CGCTGGAGGC ACGGGGGGTG
GAGTTGCAGT TTGCCGAAAT GAAGGACCCG GTGAAGGACA AGATGCGGCG ATTCGGGTTG
TTCGAGCATA TGGGAGAGAG GGCTTTTCAC CCTACAGTGG GCGCGGCAGT GGATGCCTAT
CTGGAAGAGA GTGGGGTCGA TTGGCAGCCC TGA
|
|---|
| Protein sequence | MPDTTRFDWQ RWLPGLVTLL HYKAAWLPKD IAAGLVLTTM LVPVGIAYAE ASGVPGIYGL
YATIIPLLAY ALFGPSRILV LGPDSALAAP ILAVVVQYAA SDPQRAIAIA SMMALVAGAF
CVVAGLLRLG FITELLSKPI RYGYMNGIAL TVLISQLPKL FGLKVDSEGP LRDLWHLGQA
LFAGQGHWPS FVVGAGSLVL ILLLKPFKRL PGILIAVVLA TLAVSLFNLD QMGVKVLGQL
PQGLPSFVFP WVTDIDLVEV ILGGVAVALV SFADTSVLSR SYAARLKMPV NPNQEMFGLG
VANLASGLFQ GIPISSSSSR TPVAEAAGSQ TQLTGIIGAL AVTLLLLVAP NLMQHLPNSA
LAAVVIAAAL GLFEFADLKR IFRMQQWEFW LSITCFVGVA VFGAIPGICI AVAVSVIEFL
WDGWRPHHAV LGRADGLRGY HDVQRYPQAR RIPGLVLLRW DAPLFFANAE QFQSTVMAAV
DASPTPVQRL IIAAEPVTSI DITSADMLAE LDRALEARGV ELQFAEMKDP VKDKMRRFGL
FEHMGERAFH PTVGAAVDAY LEESGVDWQP
|
|---|
| |