| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0747 |
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| Symbol | |
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| ID | 5868505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 849819 |
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| End bp | 852239 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545846 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001666993 |
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| Protein GI | 167031762 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCGT CCCCGCACAC CCCGCTTGCC CGCGCTCTGC GTATCGCCCT GCTGGGCCTG
AGTGTCAGCC TGCCCATTGG CAGCCTGGCG CAGGCTGCGC CAAGCCACCA CGTCGAAGTC
CCGGCCGGTA GCCTGGAAGG TGCCCTCAAC GCCTATGCCC GCCAGGCCGG CGTGTTGCTG
AGTTTCGACC CGGCACTCAC ACGTGGCCTG AGCAGCCGCG GCCTGTCAGG TGATTACCCG
ATCGACGTAG GCTTCGCTTC CCTGCTCGGC AACACTGACT TGGCCGCCGA AGCCAGCAGC
GATGGCAGCT GGCGCCTGGT ACGTGCGACG AGCCAAGGGG CGGTCACCTT GCAGGCACAG
ACCATTTCCG CCCTAGGCGA AGAGAACCCG CTGGGGCCGG TGGGCAGCTA CGTGGCCAAG
CGCAGTGTCA CTGCAACCAA GACCGACACG CCTATCCATG AGACCCCGCA GTCAATTTCG
GTGGTAACCC GTGAACGCAT GGAGGCTCAA GGCGTGCAGT CGGTCAATGA GGCCCTGCGT
TACACCCCGG GCGTGTCTTC CTACGGCGCC AACAACCGCT CCGACTGGTA CACGGTCGTA
CGCGGCTTCT CGCCGACGAC CTATCTAGAC GGCCTGCAAC TGCCGACCAC CATCAACCTG
GCCAGCTGGA TGGTCGACCC CTACATGCTC GAACGTGTCG AAGTGCTGCG TGGTCCGGCA
GGCGTCTTGT ATGGGCAGGG CGACCCCGGT GGGGTGATCA ACCAGGTATC CAAGCGCCCG
AGCACGGTCA GCAGCCACGA AATCCAGGCC CAGTACGGCA CTGACGCGCG CCGACAGCTG
GGCTTCGACA GCACCGGCGC GTTGGATGAC GAGGGCGTTT GGAGCTACCG CATAACGGCC
ATCGGCCATG AAGCCAACAT TCGCGACACC CCTTGGGAGG ACAAGCGCCA GGCACTCTCC
GCCGCCCTGA CCTGGCAGCC GTCGGAAGAG ACCCGGCTGA CCGTAATGGG CAATTACCTG
GCGGACGATT CCAACGCCCA GGACAACTTC CTGCCGGCAG TTGGTACTTT GTCCCACTCG
CCCTACGGCA AGATCGGTCG CGATACCTTC ACCGGCGACA AGCACTTCTC AAAGTACGAG
AAGACCCAGT ACAGCCTCGG CTACGAATTC GAAACGCGCC TGAACGACGT CTGGCAGCTG
CGCCAGAACC TGCGTTATTC GCATCTGGAC CTGAATGACA ACATGGTCTT TGGTGTTGGC
ACTACCGCCT ACTACGGCAT GGAAGGTGGT GACGAGCGCA CACTGTTACG CTACGCCGGC
ATCGAGAACC CCAAGTACAG CCGCTGGGCT GTGGATAACC AGGCCCAGGC CGACTTCAGT
ACTGGCGACA TCCGCCATAC CCTGCTGATC GGTGTGGATT GGCAGCGTCA GCAAACCTCT
GACCCGCAGG CCTACGTCCT GACCACCCCT GTCGACCTGT ATGGCGGCAC GGACTATGGC
CCGGTCGACC CAAGCCAGTT CACTCCGGAC ACCTGGAGCT ACAGCCATCA GACCAGCCGA
CAAACCGGGT TGTACCTGCA AGACCAATTG CACTTCGACG ACCATTGGGT ACTGACCCTG
GGTGGTCGCT ATGACTGGGC CACATCGCAA ACCCGAAACT GGACCGATGC CGGTTCCGAT
CCCGAAATAC ATACCCGTGA CGAGGCGTTC AGTGGCCGGG TTGGCCTGGT GTATCTGGCC
GACAACGGCC TGGCACCCTA CCTGAGCTAC AGCGAAGGTT TCACGCCAAA CCCTGGCACC
GATGCCAACA ATCAGCCATT CGAGCCCACC GAAGCCAAGC AATACGAAGC GGGTATCAAG
TACCAGCCAC CGGGCTCGAA CAGCTCGCTG ACTGCCGCTG TCTTCGAGAT TACCCAGGAC
AACGTGCTGA CCACTGCGCC AGGCAACCCC AATGACAAGG TACAGACGGG GCAGGTGCGC
TCGCGTGGCA TCGAGTTGGA AGGGGTGGCC AGCCTGAGCA ACGAGCTCAA CTTGATCGCC
ACCTATACCT ACCAGGACGT GAAGGTGACC AAGGCCAACG ACGAGACCGA TGGCAAGACG
CCCATCAGCA TCCCGACACC GCGCAACCTG GCCTCGGTAT GGGCTGACTA CACCTTGCAC
GATGGCTTGC TCAAGGGCCT GGGTTTCGGC GCAGGGGTGC GCTACACCGG TCGCAATCCG
GGGGCACCGG ACAACTCGCT GAACGTGCCG GCCTATACCT TGCTCGATGC CGCCGTGCAT
TACGAAACCG GGCCGTGGCG GTTTGCGGTA AACGCCAGCA ACCTGGCCGA CAAAGAGTAT
GTGGCGGGAT GCTATGACGC TACCCGCTGT ATCTACGGCA ATGGTCGCAC AGTGCTGGGC
ACGGCCACCT ATCGCTGGTA G
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| Protein sequence | MASSPHTPLA RALRIALLGL SVSLPIGSLA QAAPSHHVEV PAGSLEGALN AYARQAGVLL
SFDPALTRGL SSRGLSGDYP IDVGFASLLG NTDLAAEASS DGSWRLVRAT SQGAVTLQAQ
TISALGEENP LGPVGSYVAK RSVTATKTDT PIHETPQSIS VVTRERMEAQ GVQSVNEALR
YTPGVSSYGA NNRSDWYTVV RGFSPTTYLD GLQLPTTINL ASWMVDPYML ERVEVLRGPA
GVLYGQGDPG GVINQVSKRP STVSSHEIQA QYGTDARRQL GFDSTGALDD EGVWSYRITA
IGHEANIRDT PWEDKRQALS AALTWQPSEE TRLTVMGNYL ADDSNAQDNF LPAVGTLSHS
PYGKIGRDTF TGDKHFSKYE KTQYSLGYEF ETRLNDVWQL RQNLRYSHLD LNDNMVFGVG
TTAYYGMEGG DERTLLRYAG IENPKYSRWA VDNQAQADFS TGDIRHTLLI GVDWQRQQTS
DPQAYVLTTP VDLYGGTDYG PVDPSQFTPD TWSYSHQTSR QTGLYLQDQL HFDDHWVLTL
GGRYDWATSQ TRNWTDAGSD PEIHTRDEAF SGRVGLVYLA DNGLAPYLSY SEGFTPNPGT
DANNQPFEPT EAKQYEAGIK YQPPGSNSSL TAAVFEITQD NVLTTAPGNP NDKVQTGQVR
SRGIELEGVA SLSNELNLIA TYTYQDVKVT KANDETDGKT PISIPTPRNL ASVWADYTLH
DGLLKGLGFG AGVRYTGRNP GAPDNSLNVP AYTLLDAAVH YETGPWRFAV NASNLADKEY
VAGCYDATRC IYGNGRTVLG TATYRW
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