Gene PputGB1_0721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0721 
SymbolrpmA 
ID5868478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp822178 
End bp822435 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content55% 
IMG OID641545819 
Product50S ribosomal protein L27 
Protein accessionYP_001666967 
Protein GI167031736 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0211] Ribosomal protein L27 
TIGRFAM ID[TIGR00062] ribosomal protein L27 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.71975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCACA AGAAGGCTGG TGGTAGTACT CGTAACGGTC GCGACTCAGA ATCTAAACGC 
CTTGGCGTGA AGATGTATGG CGGTCAGGTT ATCAAGCCAG GCAACATCAT CGTCCGTCAG
CGCGGCACCG AATTCCACGC TGGCTACGGC GTTGGCATGG GCAAGGACCA CACCTTGTTC
GCCAAGATCG AAGGCGTGAT CAAGTTCGAG AAGAAAGGCG AGTTCATGCG CCGTTACGTG
AGCATCGTCG CCGCTTAA
 
Protein sequence
MAHKKAGGST RNGRDSESKR LGVKMYGGQV IKPGNIIVRQ RGTEFHAGYG VGMGKDHTLF 
AKIEGVIKFE KKGEFMRRYV SIVAA