Gene PputGB1_0680 details

Gene Information

• Locus tag: PputGB1_0680
• ID: 5868436
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida GB-1
• Kingdom: Bacteria
• Replicon accession: NC_010322
• Strand: +
• Start bp: 773584
• End bp: 773994
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 641545777
• Product: fimbrial protein pilin
• Protein accession: YP_001666926
• Protein GI: 167031695
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4969] Tfp pilus assembly protein, major pilin PilA
• TIGRFAM ID: [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 43
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAGGGC AACGCGGTAT CACCCTGATC GAACTGATGA TCGTCGTCGC GATCATCGGC 
ATTCTGGCGA CCATCGCCTT ACCGATGTAC ACCAACCACC AGGCCCGCTC CAAGGCTGCG 
GCCGGGTTGC TGGAGATCAG CGCGCTGAAG ACGGCGATGG ATCTACGCTT GAATGACGGG 
AAAGACGTAA CGGGCGTGAC CGAGCTGGGT GGCCAGCCGG CGACGGCGCA TTGTGCGATC 
GCAGCCGATG GCAAGGCGGC GGATGGCAGC GGCAGCATTG CTTGCACGCT GGTGGATGCG 
CCGGCCAATG TGGTGGGCAA GTCACTGACT TTGAAGCGTT CGGCAACTGG ATGGGCGTGC 
ACCACCGACA TCGAGGAAGG CCTGGCGCCC AAGGGCTGCA AGGGGGCTTG A 

 

Protein sequence

MKGQRGITLI ELMIVVAIIG ILATIALPMY TNHQARSKAA AGLLEISALK TAMDLRLNDG 
KDVTGVTELG GQPATAHCAI AADGKAADGS GSIACTLVDA PANVVGKSLT LKRSATGWAC 
TTDIEEGLAP KGCKGA