Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0678 |
Symbol | |
ID | 5868434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 771291 |
End bp | 772157 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641545776 |
Product | prepilin peptidase |
Protein accession | YP_001666925 |
Protein GI | 167031694 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCAT GGACTTTGCT GGCTGAACAG CCGGCGTACT TCCTCACCCT GGCCACGCTG CTCGGCCTGC TGGTGGGCAG CTTTCTCAAC GTGCTGGTGT ATCGCCTGCC GATCATGCTG GAGCGGCAAT GGCAGCGTGA AGCACAGGAG ATGTTGGGGC AGCCGATTGC GCAACACGAA CGGTTCGACC TGTGCCTACC GGCCTCCCGC TGCCCACATT GCGCGCATCC GATTCGCGCG TGGGAGAACA TCCCGGTGAT CAGCTATCTG GCCTTGCGCG GGCGGTGTTC ATCCTGCAAA ACCCGCATCA GCCCGCGCTA CCCGCTGGTG GAAGTGGCCA GCGCGCTGCT TTCGCTGGTG GTGGCCTGGC GCTTTGGCGC TTCGGTCGAA GCCTTGCTGG CATTACCGCT CACCTGGTGC CTGCTGGCCC TGAGCCTGAT CGATGCGGAC CACCAGTTGC TGCCGGATGC GCTGGTGCTG CCGATGCTGT GGCTGGGGCT TATCGTCAAT GCCTTTGGCA TCTATGCCCC ACTGACCGAC GCGCTGTGGG GCGCGGTGGC CGGATACCTC AGCTTGTGGA CCGTGTACTG GCTGTTCAAG CTGATCACCG GCAAGGAAGG CATGGGCTAT GGCGATTTCA AGCTGATGGC GCTGATCGGG GCCTGGGGTG GCTGGCAGGT GCTGCCGTTG ACGCTGCTGC TGTCGTCGGT GGTGGGGGCG CTGGTTGGCC TGTGCTTGCT GCGTTTGCGC CGGCATGCGA TGGGGACAGC GATACCGTTT GGCCCTTATC TGGCGATTGC GGGGTGGATT GCTGTGCTCT GGGGTGATGA AATGTACGCC TCTTACATGC AACTGCTTGG ATACTGA
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Protein sequence | MTSWTLLAEQ PAYFLTLATL LGLLVGSFLN VLVYRLPIML ERQWQREAQE MLGQPIAQHE RFDLCLPASR CPHCAHPIRA WENIPVISYL ALRGRCSSCK TRISPRYPLV EVASALLSLV VAWRFGASVE ALLALPLTWC LLALSLIDAD HQLLPDALVL PMLWLGLIVN AFGIYAPLTD ALWGAVAGYL SLWTVYWLFK LITGKEGMGY GDFKLMALIG AWGGWQVLPL TLLLSSVVGA LVGLCLLRLR RHAMGTAIPF GPYLAIAGWI AVLWGDEMYA SYMQLLGY
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