| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0678 |
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| Symbol | |
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| ID | 5868434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 771291 |
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| End bp | 772157 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641545776 |
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| Product | prepilin peptidase |
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| Protein accession | YP_001666925 |
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| Protein GI | 167031694 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCAT GGACTTTGCT GGCTGAACAG CCGGCGTACT TCCTCACCCT GGCCACGCTG
CTCGGCCTGC TGGTGGGCAG CTTTCTCAAC GTGCTGGTGT ATCGCCTGCC GATCATGCTG
GAGCGGCAAT GGCAGCGTGA AGCACAGGAG ATGTTGGGGC AGCCGATTGC GCAACACGAA
CGGTTCGACC TGTGCCTACC GGCCTCCCGC TGCCCACATT GCGCGCATCC GATTCGCGCG
TGGGAGAACA TCCCGGTGAT CAGCTATCTG GCCTTGCGCG GGCGGTGTTC ATCCTGCAAA
ACCCGCATCA GCCCGCGCTA CCCGCTGGTG GAAGTGGCCA GCGCGCTGCT TTCGCTGGTG
GTGGCCTGGC GCTTTGGCGC TTCGGTCGAA GCCTTGCTGG CATTACCGCT CACCTGGTGC
CTGCTGGCCC TGAGCCTGAT CGATGCGGAC CACCAGTTGC TGCCGGATGC GCTGGTGCTG
CCGATGCTGT GGCTGGGGCT TATCGTCAAT GCCTTTGGCA TCTATGCCCC ACTGACCGAC
GCGCTGTGGG GCGCGGTGGC CGGATACCTC AGCTTGTGGA CCGTGTACTG GCTGTTCAAG
CTGATCACCG GCAAGGAAGG CATGGGCTAT GGCGATTTCA AGCTGATGGC GCTGATCGGG
GCCTGGGGTG GCTGGCAGGT GCTGCCGTTG ACGCTGCTGC TGTCGTCGGT GGTGGGGGCG
CTGGTTGGCC TGTGCTTGCT GCGTTTGCGC CGGCATGCGA TGGGGACAGC GATACCGTTT
GGCCCTTATC TGGCGATTGC GGGGTGGATT GCTGTGCTCT GGGGTGATGA AATGTACGCC
TCTTACATGC AACTGCTTGG ATACTGA
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| Protein sequence | MTSWTLLAEQ PAYFLTLATL LGLLVGSFLN VLVYRLPIML ERQWQREAQE MLGQPIAQHE
RFDLCLPASR CPHCAHPIRA WENIPVISYL ALRGRCSSCK TRISPRYPLV EVASALLSLV
VAWRFGASVE ALLALPLTWC LLALSLIDAD HQLLPDALVL PMLWLGLIVN AFGIYAPLTD
ALWGAVAGYL SLWTVYWLFK LITGKEGMGY GDFKLMALIG AWGGWQVLPL TLLLSSVVGA
LVGLCLLRLR RHAMGTAIPF GPYLAIAGWI AVLWGDEMYA SYMQLLGY
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