| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0615 |
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| Symbol | |
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| ID | 5868361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 697178 |
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| End bp | 702076 |
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| Gene Length | 4899 bp |
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| Protein Length | 1632 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641545703 |
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| Product | alpha-2-macroglobulin domain-containing protein |
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| Protein accession | YP_001666862 |
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| Protein GI | 167031631 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0451141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAACA AAGGATTGTT GCTGGCCTGC GCGCTGGCGT TGCTCAGTGC CTGTGACTCA
TCCGCGCCGG ACAAACCGGC GCCGGACAAA CCGGCGGCCA CCGCGCCCGC CGAAGCCCCC
GCCCCCAAAC GCGAAGACCC GGCCGTGCTC GCCAAGCGCT ACGAGGGCCG CGAACTCACG
GTGCTGGATG TATCCGAAGT GCAGCTCGAT GGCGCTGCGA CGCTGTCGAT CAGCTTCTCC
GCGCCGCTGG ATGCCAAGCA GGACTTCGCC ACCAAGGTGC ACCTGGTCGA CACCGTCAAA
GGCAAGCTCG ACGGCGCCTG GGAGCTCTCC GACAACCAGA TGGAACTGCG CCTGCGTCAC
CTGGAACCGC AGCGCAAGCT GGTGCTGACC GTCGACAAGG GCCTGCTGGC GGTCAACGGC
AAGCAACTGG ACAGTGAATC GATCACCCAG CTGGAAACCC GCGACATGCA GCCGACCATC
GGCTTTGCCA GCCGCGGCTC GCTGCTGCCC ACGCGCCTGG CCGAGGGGCT GCCGGTGATT
GCCCTGAACG TCGACAAGGT CGATGTCGAG TTTTTCCGGG TGAAGCCGGA AATGCTCTCG
TCTTTCCTGG CCAGCTGGGG GCGCAACAGC AGCCTGTACT ACTACCAGTC CAAGGAAACC
CTGGACATGG CCGAGCTGGT CTACAGCGGC CGCTTCGACC TCAACCCCGC CCGCAACACC
CGCGAAACCG TGCTGCTGCC CATCGCCGGC ATCAAGCCGC TGCAGGACCC GGGCGTGTAC
CTGGCAGTGA TGCGTGCTTC GGGCACTTAC GACTACTCGC AGCCGGCGAC CCTGTTCACC
CTCAGCGACA TCGGCGTGTC GGCGCACCGC TACCGCGACC GCCTGGACGT GTTCGCGCAG
GCGCTGGAAG GCGGCAAGGC GATGAGCGGC GTCAATCTCG AAATCCATGA CGAGAAGGGC
AAGTTGCTGG CCCAGGCCAG CACCGATGGC AAGGGCCACG CCCAGCTGCC GATCACGTCC
AAGGCCGATA CCCTGATTGC TACCCAAGGT GTGCACACCA CCCTGCTGCG CCTGAACACC
GCCGCCCTGG ACCTGGCCGA GTTCGACATT ACCGGCCCGC AAGCCAACCC GTTGCAGTTC
TTCATCTTCG GCCCGCGTGA CCTGTATCGC CCAGGCGAAA CGGTGCTGCT CAACGGCCTT
CTGCGCGACC AGGACGGCAA GCCGGTCAAG GCCCAGCCGG TGAGTGTGGA AGTGCGTCGC
CCGGATGAGC AGGTGAGCCG CAAGTTCGTC TGGGAGGCCG ACAGCAATGG CTTGTACCAA
TACCAGTTGC AGCTCGCCAC CGAGGCCCCG ACTGGCCGTT GGCAACTGCT GCTCGACCTG
GGCGGCGGGC GCAAGCAGGT GTATGAATTT CTCGTCGAGG ACTTCCTGCC TGAACGCCTG
GCGCTGGAGC TGAAGGGCAG CAGCACGCCG CTGTCGCCGG AGGAGGATGC GCGCATCCAG
GTCAATGGCC GTTACCTCTA TGGCGCCCCG GCTGCCGGTA ATCGCCTGAG TGGCCAGGCC
TATGTGCGTC CCCTTCGCGA AGCGGTGCCT GCGCTGCCGG GCTACCAGTT CGGCTCGGTC
ACCGAAACCG AGCTGAACCA GGACCTGGAG CTGGACGAAG TCACGCTCGA TCAGGCTGGC
AAGGCCGTGG TCGATATCGA AAGCCGTTGG GCCGAAGCCC GCTCACCGCT GCAACTGACC
GTGCAGGCCA GCCTGCAGGA GTCCGGTGGC CGGCCGATCA CCCGTCGTCT GGAGCAACCG
ATCTGGCCTG CCGAGCGCCT GCCGGGCCTG CGTGGCCTGT TCGAGGGTGA GGAAACCGAT
AGCGACGGGC CGGTGGAGTT CGAATTCCTG GTGGCCGACC GCGACGGCAA CAAGCTGGCG
GCCAACGACC TCAAGGTACG TCTGATTCGC GAGCGTCGAG ACTACTACTG GAACTACTCG
CAGAGCGATG GCTGGAGCTA CGCCTACAAC GAGAAGTTCC TCACCCAGCG TGAGGAGACC
GTTAGCGTCA AGGCCGGCTC CACGGCCAAA CTGAGCTTCC AGGTTGAATG GGGCCCGTAC
CGCGTGGAGG TCGAAGACCC GCAGACCGGC CTGGTGTCCA GCGAGCGCTT CTGGGCCGGT
TATCGCGCCC AAGATAACGC CGAAGGCGGC GCGGTGCGCC CGGACCAGGT CAAGCTGGCG
CTGGATAAAC CGTCCTACGC CGATGGCGCT ACTGCCAAGG TCACCGTCAC GCCACCTGCT
GCTGGCAGCG GCTACCTGAT GATCGAGTCC AGCGATGGCC CGCTGTGGTG GCAGGAGATC
GACGTGCCCG CCGAGGGCAA GACCTTTGAT GTGCAACTGG ACAACGCCTG GGCGCGCCAC
GACCTTTACA TCAGCGCGCT GGTGATTCGC CCTGGAGAGC GCAAGGCCAA CGCCACACCA
AAACGCGCCG TGGGTGTGCT GCACCTGCCG TTGGACCGCG CCGAACGCAA GCTGGCGGTG
AGCCTGCAGG CACCCGAAAA AATGCGCCCG AAACAGCCGC TGACCGTAAA GGTGAAAGCC
GCCAATGCCG ATGGCAGCGT GCCCAAGCAG GTGCATGTGC TGTTGTCTGC GGTGGACGTG
GGCATCCTCA ACATCACTGA TTTCAAAACC CCGGATCCGT TTGCCAGCCT GTTCGGGCGC
AAGGCCTATG GTGCCGACCA ACTGGACATC TACGGCCAGT TGATCGAAGC CGGCCAGGGC
CGCCTGGCGA GCCTGGCGTT TGGCGGTGAC GCGGCAATGG CCAAGGGTGG CAAGCGCCCT
AACACCACGG TCACCATCGT CGCCCAGCAG AGCCTGCCGG TGACCCTGGA CGACAAGGGT
GAGGGCCAGG CCACGGTCGA TATCCCCGAC TTCAACGGCG AACTGCGGCT GATGGCCCAG
GCCTGGACCG AAGAACACTT CGGCATGGCA GAAGGCAAAA CCGTGGTCGC TGCACCGTTG
ATTGCCGAGC TGTCGGCACC GCGCTTCCTG GCCGGTGGCG ACCGCACCAG CCTGGCACTG
GACCTGGCCA ACCTGTCGGG CCGTGCTCAA CAGTTGAACG TTGAAATCAC CATCGATGGG
CAACTGAGCC TGGCGGCCAA CGCCGTGCAG AGCGTTAACC TGACCGAAGG CCAGCGCTCG
ACACTGATGA TCCCGGTACA GGCCCAAGGG GGCCTGGGGC AGGGTAAAGT GCATGTGCGG
GTCACTGGCC TGCAGTTGCC AAACGAGCCC GCCACCGCGT TCGAGCGTGA GTGGACATTG
GGCGTGCGCC CAGCTTATCC GGCGATGCTC AAGCACTACC GCGTGGCGTT GAAAGACCAG
CCATGGACCT TGCCTGAAGC GGACCTGGCA GCTTTCGAAC CTGCCGGCCT GGAAGCCAGC
CTGGCCTTGT CGAGCCGGCC GCCGCTGAAC CTGGCCGAGC AGATTCGCGC GTTGGAAGCC
TACCCCTACG GTTGCCTGGA ACAGACCACC AGCGGCCTGT ACCCGTCGTT GTACGCTGAT
GCCGATAGCC TCAAACGCCT GGGCATCAAG GGCGAGCCGG CGCAGGTGCG CAAGCGCAAG
ATCGAAATGG GCATCGAGCA CCTGCTGGGC ATGCAGCGCT ACAACGGCAG CTTTGGCCTG
TGGAGTTCGG ACAGCGAAGA AGAGTACTGG CTAACCGCCT ACGTCACCGA CTTCCTGCTG
CGTGCCCGTG ACCAAGGTTA CGGCGTGCCG GCCGAAGCGC TGAAGAAGGC CAGCGAGCGC
CTGCTGCGCT ACCTGCAGGA ACGCAACCTG ATCGAAGTCG ACTACAGCGA AAATGCCGAC
CACACTCGCT TTGCCGTGCA GGCCTACGCG GCGCTGGTGC TGTCGCGCAG CCAGCAGGCG
CCATTGGGTG CCCTGCGAGG CCTGTTCGAG CGCCGCGCCG ATGCCCGTTC TGGCCTACCG
CTGGTGCAAT TGGCGGTGGC ACTGGACAAG ATGGGTGACA AACCGCGTGC CGAGCAAGCC
TTGCAGGCGG GCCTGGGCAT CAGCCGTGGC AAAGGCTGGA TGGCCGATTA CGGCAGCGCC
CTGCGTGACC AGGCGCTGAT CCTGGCACTG CTGCAGGAAA GCAACCTGGC CAGCAGCCAG
GTCGATCAGC GCCTGTTCGC CTTGTCGGAT GAGCTGGCGG CCAACCGCTG GCTGTCTACC
CAGGAGCGCA ATGCACTGTT CCTTGCCGGC CGTAGCCTGC TGGGCAAGCC GGAAGGCAAG
TGGCAGGCAC GCCTGGACAG TGCTGGCGAG GTGCGCGAGT TCAACAATGC CGAGGCCGGC
ATGAAGCTGG AAGGCCCGCT ACTGGCATCG CCGCTGAGTG TGCAGAACGA AGGCAGCGAG
ACGCTGTACC AGCAGCTGAC CTTGTCGGGC TACCCACGCC AGGCGCCTGC TGCTGGCGGC
AATGGCCTGC AGATTCGCCG AGAGTACTTG GGCATGAATG GCCAGCCGCT GGACCTGCAC
AACCTGCGCA GTGGTGACTT GGTGCTGGTG CACCTGGCGC TCAAGGCTGA AGACCGTGTA
CCGGATGCGC TGGTGGTGGA TTTGCTGCCA GCAGGCCTGG AGCTGGAAAA CCAGAACCTG
GCGCAAAGCG CCGCCAGCCT GGACAACGCC AGCAGCGCGG TGAAGGAGTG GCGCGAGTCT
ATGCAGAACG CCAGCGTAGT GCACCAGGAG TACCGTGATG ACCGTTATGT TGCCGCGCTC
AAGCTCGACA GCTACGGCAC CACCCACCTG CTGTACCTGG CGCGGGCAGT GACCCCGGGC
ACCTACCGCG TACCGCCGCC GCAGGTTGAG TCGATGTACC GGCCGAACCT GCAGGCTGTG
GGCGATGGGC AAGGGGAGAT GACCGTAAAA GCCCGCTGA
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| Protein sequence | MFNKGLLLAC ALALLSACDS SAPDKPAPDK PAATAPAEAP APKREDPAVL AKRYEGRELT
VLDVSEVQLD GAATLSISFS APLDAKQDFA TKVHLVDTVK GKLDGAWELS DNQMELRLRH
LEPQRKLVLT VDKGLLAVNG KQLDSESITQ LETRDMQPTI GFASRGSLLP TRLAEGLPVI
ALNVDKVDVE FFRVKPEMLS SFLASWGRNS SLYYYQSKET LDMAELVYSG RFDLNPARNT
RETVLLPIAG IKPLQDPGVY LAVMRASGTY DYSQPATLFT LSDIGVSAHR YRDRLDVFAQ
ALEGGKAMSG VNLEIHDEKG KLLAQASTDG KGHAQLPITS KADTLIATQG VHTTLLRLNT
AALDLAEFDI TGPQANPLQF FIFGPRDLYR PGETVLLNGL LRDQDGKPVK AQPVSVEVRR
PDEQVSRKFV WEADSNGLYQ YQLQLATEAP TGRWQLLLDL GGGRKQVYEF LVEDFLPERL
ALELKGSSTP LSPEEDARIQ VNGRYLYGAP AAGNRLSGQA YVRPLREAVP ALPGYQFGSV
TETELNQDLE LDEVTLDQAG KAVVDIESRW AEARSPLQLT VQASLQESGG RPITRRLEQP
IWPAERLPGL RGLFEGEETD SDGPVEFEFL VADRDGNKLA ANDLKVRLIR ERRDYYWNYS
QSDGWSYAYN EKFLTQREET VSVKAGSTAK LSFQVEWGPY RVEVEDPQTG LVSSERFWAG
YRAQDNAEGG AVRPDQVKLA LDKPSYADGA TAKVTVTPPA AGSGYLMIES SDGPLWWQEI
DVPAEGKTFD VQLDNAWARH DLYISALVIR PGERKANATP KRAVGVLHLP LDRAERKLAV
SLQAPEKMRP KQPLTVKVKA ANADGSVPKQ VHVLLSAVDV GILNITDFKT PDPFASLFGR
KAYGADQLDI YGQLIEAGQG RLASLAFGGD AAMAKGGKRP NTTVTIVAQQ SLPVTLDDKG
EGQATVDIPD FNGELRLMAQ AWTEEHFGMA EGKTVVAAPL IAELSAPRFL AGGDRTSLAL
DLANLSGRAQ QLNVEITIDG QLSLAANAVQ SVNLTEGQRS TLMIPVQAQG GLGQGKVHVR
VTGLQLPNEP ATAFEREWTL GVRPAYPAML KHYRVALKDQ PWTLPEADLA AFEPAGLEAS
LALSSRPPLN LAEQIRALEA YPYGCLEQTT SGLYPSLYAD ADSLKRLGIK GEPAQVRKRK
IEMGIEHLLG MQRYNGSFGL WSSDSEEEYW LTAYVTDFLL RARDQGYGVP AEALKKASER
LLRYLQERNL IEVDYSENAD HTRFAVQAYA ALVLSRSQQA PLGALRGLFE RRADARSGLP
LVQLAVALDK MGDKPRAEQA LQAGLGISRG KGWMADYGSA LRDQALILAL LQESNLASSQ
VDQRLFALSD ELAANRWLST QERNALFLAG RSLLGKPEGK WQARLDSAGE VREFNNAEAG
MKLEGPLLAS PLSVQNEGSE TLYQQLTLSG YPRQAPAAGG NGLQIRREYL GMNGQPLDLH
NLRSGDLVLV HLALKAEDRV PDALVVDLLP AGLELENQNL AQSAASLDNA SSAVKEWRES
MQNASVVHQE YRDDRYVAAL KLDSYGTTHL LYLARAVTPG TYRVPPPQVE SMYRPNLQAV
GDGQGEMTVK AR
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