| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0608 |
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| Symbol | |
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| ID | 5868354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 688929 |
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| End bp | 690287 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641545696 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001666855 |
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| Protein GI | 167031624 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0597995 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAG CAGTCGAGCC GAGCCCGCAA TGCCCCGTGC AACAGCTGAC GCGTAACGGC
CTGCGCAAGG ACGACCCGCT CGACCCACTG CTGCTGCCGC CCCCACGCAA ACCGGTGTAC
ATCCTGCTGC AGGATCATGA GCGTGCCCAG CGGTTGGCCC AGCAACTGGA GTTCTTCGGC
CTGGTGGTGC AAGCACTGCC CAATGCTACG GCGTTTCTCG CCTCGATCTG CGAGTACCCG
CCTTCGGCCA TCATCATGGA TGTCGACTTC ACCGGTACGG GCCAAGGCCT GCAGCTGGCC
GCCCAGGTGC AGCAAGGGTT GGCGCGACAT ATTCCGCTGC TGTTCTTCAG CCACCACGAA
GCCGACACCC CAACCCGCCT TGCCGCCGTA CGCGCCGGTG GCCAGGACTT TCTCACCGGC
AGCCTGGAGG CTTCCAGCCT GCTGGAAAAG GTCGAACTGC TGACCAATGC CACCCCGCAC
GACCCGCTGC GCGTGCTGAT CATCGACGAC TCGCGCACCC AGGCCCTGTA CACCGAGCGG
GTGCTGGCCG GCGCCGGCAT GGTCACCCGC AGCCTGACCG ACCCGATCCG TACCATGGCC
GAGCTTGCCG ACTTCCAGCC CGACCTGATC ATCCTCGACC TGTACATGCC AGCCTGCACC
GGCCCGGAAC TGGCCAAGGT GATTCGCCAC AGTGACCGTT ATGTGAGCGT GCCGATCATC
TACCTGTCAG CCGAGGACGA CCTGGACAAG CAGCTGGATG CCATGAGCGA AGGCGGTGAT
GACTTTTTGA CCAAACCCTT TCGCTCACGT CACCTGATCA CCACCGTGCG CAACCGCGCC
GCCCGCGCCC GGCACTTGAA GGCGCGCATG GTGCGCGACA GCCTGACCGG GCTGTACAAC
CACACCCACA TCCTGCAACT GCTGGAAGAC TGCAGCTTCC GCGCCCGCCG CGAACAGCAG
CCGTTGAGCT TTGCCATGCT CGATATCGAC CACTTCAAAA AGATCAACGA CCGCCACGGC
CACCCCATGG GCGATCGGGT GATCAAGAGC CTGGCGTTGT TCCTCAAGCA GCGCTTGCGC
AAGACCGATT TCATTGGCCG CTATGGTGGC GAAGAGTTCG CCATCGTCAT GCCCAATACC
GCGCTGGACG CGGCACACAG GGTACTGGAC GAAATTCGCC GGCGCTTTGC CGAGATTCTC
TACCCGGCGC AGCCACGGGA TTTGCAGTGC ACCTTCAGTG CCGGAGTCGT ACAGCTGGAC
GAGGGGCTGG ATGCACTGAC CATGGCCAGT GCGGCGGACG AAGCGCTGTA CCGGGCCAAG
CACGCGGGGC GCAATTGCGT AGTGCGTGTA GAGCCCTAA
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| Protein sequence | MSKAVEPSPQ CPVQQLTRNG LRKDDPLDPL LLPPPRKPVY ILLQDHERAQ RLAQQLEFFG
LVVQALPNAT AFLASICEYP PSAIIMDVDF TGTGQGLQLA AQVQQGLARH IPLLFFSHHE
ADTPTRLAAV RAGGQDFLTG SLEASSLLEK VELLTNATPH DPLRVLIIDD SRTQALYTER
VLAGAGMVTR SLTDPIRTMA ELADFQPDLI ILDLYMPACT GPELAKVIRH SDRYVSVPII
YLSAEDDLDK QLDAMSEGGD DFLTKPFRSR HLITTVRNRA ARARHLKARM VRDSLTGLYN
HTHILQLLED CSFRARREQQ PLSFAMLDID HFKKINDRHG HPMGDRVIKS LALFLKQRLR
KTDFIGRYGG EEFAIVMPNT ALDAAHRVLD EIRRRFAEIL YPAQPRDLQC TFSAGVVQLD
EGLDALTMAS AADEALYRAK HAGRNCVVRV EP
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