Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0596 |
Symbol | |
ID | 5868342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 672641 |
End bp | 674374 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641545684 |
Product | peptidase C13, legumain asparaginyl peptidase |
Protein accession | YP_001666843 |
Protein GI | 167031612 |
COG category | [S] Function unknown |
COG ID | [COG4642] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0772523 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCCAC TGCTCCCCAT TACCCTGGTC CTGCTGCTCG CCGCCTGTGG CGATGGCGAA TCGCTGCTTC CGCCAGACGC GCGCCTGCCT GACGGCGGGC GTTACCGGGG GCAGGTGGTC GATGGCCTGC TGCAGGGTGA GGGCCGGATC GACTACCCCA ACGGCAGCTG GTACGCCGGC AGCTTCAAGG ATGGCCAGTG GCACGGCCAG GGCGAATGGC ATGGCCAGAA CGGCGAGGTG TACCGTGGCC AGTTCGCCGA GGGGCTGTTC CAGGGCCTGG GCGATTTGAC CACCCCGGGC AGCCACTATG GCGGCACGTT CAAGCATGGC CGTCGCGACG GCGAAGGCAC CCTCAAGCAG GCCGACCAGA CCTACCGCGG CCAGTTCAAG GACGACCTCT ACGACGGCGC GGGCGAGCTG GAACTGGCCG ACGGCAGCCG CTACCAGGGG TTGTTCGCCA AAGGCAAGCC CAACGGTGCC GGCGTGCGTA GCGACGCCAG CGGCAACCAG TTCAGCGGCC ACTTCATCAA CGGCCAGTTA CAAGGCAGCG GCACCTACGA CAGCGTTGAC GGCGAGCAGT ACATCGGTGA GTTCAAGGAC AACCGCCTGG AGGGCCGTGG CCGCTACGAA AATGCCGATG GCGATGTATG GATCGGTGAA TTCAAGGATG GCTCGCTGGT GGGTGAAGGC GAACTGCTGG GCAGCGATGG CAGCCACTAC AAAGGCGAGT TCGCCGATTG GCGCCTATCG GGCCAAGGCA GCCTGCAACT GGCCGACGGC AGCCAGTACA TCGGCGGCTT CCTCAATGAT GCCTACCATG GCCATGGCCG ATTGATCCTG CCCAGCGGCA AGGTTGAAAG CGGCGTATGG GCAAATGGCG TGCGCGTGCG TGACCAGAAG GGCAAGCTGC TGCCCGACCC ACTGGACCTG GCACTGCTCA ACCAGGGCCG GCTGCTGGAA GAAGCGCTGG CCAGGGTGCC GCGCTCGGCG CCCCCGATCC AGCTGTACAG CCTGGTGGTG GCCGGCGATG GCCAGCAGAG CGTGTTCCTG CGTGAAGCCG ATTATGTCAG CAACATGCTC AAGGTGCGCT TTGGCGCCCG TGGCCAGGTG ACCCTGGTCA ACCACCGCGA CCATATGGCC ACCCGCCCCA TGGCCACCCG CGAGAACCTC ACCCGTGCCG CCAGCACGCT GGCCGAACGC AGCGGCCCCG AAGACCTGGT GTTCATCTAC CTCACCAGCC ATGGCAGCCA GGACCACCAG TTGGTGCTCG ACCAGCCGCG CCTGCAGCTG GCCGACCTGT CCGCCGACGA GCTGGCCACC GCCCTGGCGC CGTTGAAGGA CCGCGACAAG GTAATCGTCA TATCCGCCTG CTATTCAGGG GGCTATATCG CCCCTCTCAA AGATGAGCGC ACGCTGATCA TGACCGCCGC CCGGGCCGAC CGCGTCTCCT TCGGCTGCTC GGAAGAGGCC GACTTCACCT ACTTTGGCGA TGCCTTGTTC GCCGAAGCGC TGAACCAGAC CGACGACCTG AAACAGGCGT TTGAACTGGC GCGCGCCAGC GTTGCCGAAC GAGAACAAAG GGAAGGCTTC GAAGCCTCTG AACCGCAGCT ATGGGCGCCG CCAGCCGTGC TTGAACACTG GCAGCACCTG CGCCGCCAAC AGGCCGAAGA AGCTTTGCGT AATGCCGCAC AGGCCGCCGT GGGGGAACAG GCAAAAACGC CCCGCAGCCA CTAA
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Protein sequence | MRPLLPITLV LLLAACGDGE SLLPPDARLP DGGRYRGQVV DGLLQGEGRI DYPNGSWYAG SFKDGQWHGQ GEWHGQNGEV YRGQFAEGLF QGLGDLTTPG SHYGGTFKHG RRDGEGTLKQ ADQTYRGQFK DDLYDGAGEL ELADGSRYQG LFAKGKPNGA GVRSDASGNQ FSGHFINGQL QGSGTYDSVD GEQYIGEFKD NRLEGRGRYE NADGDVWIGE FKDGSLVGEG ELLGSDGSHY KGEFADWRLS GQGSLQLADG SQYIGGFLND AYHGHGRLIL PSGKVESGVW ANGVRVRDQK GKLLPDPLDL ALLNQGRLLE EALARVPRSA PPIQLYSLVV AGDGQQSVFL READYVSNML KVRFGARGQV TLVNHRDHMA TRPMATRENL TRAASTLAER SGPEDLVFIY LTSHGSQDHQ LVLDQPRLQL ADLSADELAT ALAPLKDRDK VIVISACYSG GYIAPLKDER TLIMTAARAD RVSFGCSEEA DFTYFGDALF AEALNQTDDL KQAFELARAS VAEREQREGF EASEPQLWAP PAVLEHWQHL RRQQAEEALR NAAQAAVGEQ AKTPRSH
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