| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0571 |
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| Symbol | |
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| ID | 5868317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 643437 |
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| End bp | 645323 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545659 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001666818 |
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| Protein GI | 167031587 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.487741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACTGC CCATGAAAAC CCCAACCTTC GCCACCCTGC TCTGCCTCCC TCTTCCGCTG
CTGGCCACTG AGCGCGACGA CGCCCTCAAG CTCCCCGACG TATTGATCAG CGCCAGCCGC
CAAGTCGAAT CGCGCACCGC TACCAGCGCC GCCAACACCG TCTTCACCCG CACCGACATC
GACCGCCTGC AACCCACCAG CGTCACCGAC CTGCTCACCC GCGTGCCCGG CGTGCAGGTG
GCACCTACCG GTGGCCGTGG CAGCCTGCCT GGCATCTTCA TTCGCGGCAC CAAGGCAGCA
CAAAGCCTGG TGCTGGTCGA TGGCGTGCGC ATCGCCAACG CCACCTCCGG CGACAGCGGC
CTGCAGTTTC TCGACGTCGA CCAGATCGAG CGCATCGAAG TGCTACGCGG CTCGCGCTCG
GCGGTGTACG GCAGCGATGC CATTGGCGGT GTGATCCAGA TTTTCACCCG CCGTAGCAAT
GGCCCCGGCC TGCAGCCGCG CCTGCGCATG GCCGCTGGCA GCAACCAGAC CTTTCAACGC
AGCCTGGGGC TTTCTGGCGG CAACGATGCG ACCCGCTTCA ACCTGGGCGC CAGCCTGGAT
GAAACTGCCG GCATCGACTC GACCGGGCCG TCCTTCGACA GCGATGGCGA CCACGACGCC
TACCGCAACC GATCGCTCAA CCTGAGCCTG AGCCATACGT TCAACGAACG TTTCGAGGCA
GGTGTAAACC TGCTCGACAG CCGCGGGCGC AGTGAATACG ACAATCCGTA CGGGCGACTC
GATGAAGATA CCTGGCTGAG TTATCCACAA CAGCCCTACA CCGATTTCAG CGTCAGCAGC
CTGGGCGGCT GGTTCGATGC CCAACTCAAC GACGCCTGGC ACTCGAGGCT GGAACTGGGC
CACAGCGAAA ACCGCGACGA CAAACGCGAC AAACTCAGCG ACCAGCGCTT CATTTACAAC
ACCTATCGTG ATCAGGTCAC CTGGCAGAAC GATCTCGCCT TCGACGACCA AAACCAACTG
ATGCTCGGTG GCGATTGGTA CGAGGAACGC TTCCATGGCA CGGCGAACTT CAGCGAAGAC
AGCCGCTGGA ACCGCGCCGC CTTCGCCCAG TACCGTTTTA CCGGGGAACA CTTCTCGAGC
GAGCTCGGCG TACGTCACGA CCGCAACCAA CAGTACGGCG ACCAGACCAC TTGGAACGCC
AGCCTTACCC TTCCATTGAA TTCCCGCAAC GACCTACTGG CGTCTTACAG CGAAGGGTTT
CGCGCCCCCA CTTTCAATGA CCTCTACGAC GTACAGTACG GTAACCCGGA CCTGCGCCCC
GAGCACTCGA AGAGTTACGA GCTGCAATGG CGCAGCCAAC TGGCCAGCCA TACCCGACTG
GAAGCCTCGC TGTATCGCAC CGACCTACGC GATGCGATCA ACTACGACCC AACGCTCAGG
CGACCCGGCA ATGTCGACAA TGCACGCATC AATGGCTTCG AGTTGTCGTT GCTGCAGGAG
TGGGCTGGCT GGACCTCTCA GTTGGGGGTG AGCATGATTG ATCCCCGAGA CCGCGAAAGC
GGACATACCC TGCAGCGACG CGCCCGTCGC ACGTTGAACC TTGACCTGGA TCGTCAGTTC
GAACGCTTCA GCGTGGGCGC GAGCTGGCAG GCTGTCAGCG GCAGCTACGA CGATCCATCG
AACAATGAGC ACATAGGTGG CTATGGACTT GTCGGCCTAC GAGGCGGCAT GCGCCTGACG
ACGGATGTAG AGCTTGAACT GAAGCTCGAC AACCTGCTGG ACAAACAGTA CAGCCGAGCC
ATGTACAGCT TCGATGGCAG CCAGTACGGC TACCGCGAAG AAGGCCGCAC GCTGCTGTTC
AGCGTTACCT GGACACCGGT GCTTTAG
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| Protein sequence | MVLPMKTPTF ATLLCLPLPL LATERDDALK LPDVLISASR QVESRTATSA ANTVFTRTDI
DRLQPTSVTD LLTRVPGVQV APTGGRGSLP GIFIRGTKAA QSLVLVDGVR IANATSGDSG
LQFLDVDQIE RIEVLRGSRS AVYGSDAIGG VIQIFTRRSN GPGLQPRLRM AAGSNQTFQR
SLGLSGGNDA TRFNLGASLD ETAGIDSTGP SFDSDGDHDA YRNRSLNLSL SHTFNERFEA
GVNLLDSRGR SEYDNPYGRL DEDTWLSYPQ QPYTDFSVSS LGGWFDAQLN DAWHSRLELG
HSENRDDKRD KLSDQRFIYN TYRDQVTWQN DLAFDDQNQL MLGGDWYEER FHGTANFSED
SRWNRAAFAQ YRFTGEHFSS ELGVRHDRNQ QYGDQTTWNA SLTLPLNSRN DLLASYSEGF
RAPTFNDLYD VQYGNPDLRP EHSKSYELQW RSQLASHTRL EASLYRTDLR DAINYDPTLR
RPGNVDNARI NGFELSLLQE WAGWTSQLGV SMIDPRDRES GHTLQRRARR TLNLDLDRQF
ERFSVGASWQ AVSGSYDDPS NNEHIGGYGL VGLRGGMRLT TDVELELKLD NLLDKQYSRA
MYSFDGSQYG YREEGRTLLF SVTWTPVL
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