| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0565 |
|---|
| Symbol | |
|---|
| ID | 5868311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 639256 |
|---|
| End bp | 640224 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641545653 |
|---|
| Product | thiamine monophosphate kinase |
|---|
| Protein accession | YP_001666812 |
|---|
| Protein GI | 167031581 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0611] Thiamine monophosphate kinase |
|---|
| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGAGT TCGAGCTGAT CAACCATTAC TTCGCCGCCG CGCCCTGTGC GCAGGGCGGC
GAGGGCGTGG CCCTGGGGAT CGGCGACGAC TGCGCCCTGC TGGATCTTCC CCCCGGTGAG
CAACTGGCGG TGTCCACCGA CACCCTGGTC GCCGGGGTGC ATTTTCCTGT TGCTTGCGAT
CCGTTGCTGC TCGGCCAGCG TTCGTTGGCC GTGGCGGCCA GTGACCTGGC AGCCATGGGC
GCGACTGCAA TCGGCTTTAC CCTCGCCCTG ACCCTGCCTG ACGTTGGCCC TGGCTGGCTG
TCGGCCTATG CCGACGGCCT CAGCCGCATG GCCCAGCGTT GCCGCATGAG CCTGATTGGT
GGCGACACCA CTCGCGGCCC GTTGAGTATC ACTGTGACCG TGTTTGGTCG CGTGCCGGTA
GGCCAGGCCT TGCGCCGCAG CGGCGCACGG CCTGGCGACC TGCTGTGTGT CGGTGGTTCG
CTGGGCAAGG CTGCCGGTGC ATTGCCGCTG GTACTCGGTG AGCGCGAGGC GCCGGCTGCG
CAAGCCGAGC CGTTGTTGGC CCACTACTGG TCGCCAATGC CACAGCTCAC CCTTGGCGCA
CTGCTGCGTG GCCGGGCCAC AGCGGCACTG GATATCTCCG ACGGGTTGCT CGCCGATTGT
GGGCATATCG CCAAGGCGTC CGGCGTTGCG CTGGAGGTGA ACCTGGCGCA AGTACCAGTG
TCTCCTGCTT TGGAAGCCTT CCTCGGTCGT GAAGCTGCGG TGCGGGCAGC GCTCACCGGT
GGCGACGATT ACGTACTGGC CTTCACTTTG CCGCCCGAGG CGCTCGCGCC CCTGGCTGCC
TTCGACACTA TCGAAGTGCA TACCATCGGC CGAGTGCTCG AAGGGCAGGG CGTGACCTTG
CGCGACGCGC AAGGCCAGGA CATCACCCCC GTTCAGCGGG GCTATCAACA CTTTAGGGAG
ACACCGTGA
|
|---|
| Protein sequence | MGEFELINHY FAAAPCAQGG EGVALGIGDD CALLDLPPGE QLAVSTDTLV AGVHFPVACD
PLLLGQRSLA VAASDLAAMG ATAIGFTLAL TLPDVGPGWL SAYADGLSRM AQRCRMSLIG
GDTTRGPLSI TVTVFGRVPV GQALRRSGAR PGDLLCVGGS LGKAAGALPL VLGEREAPAA
QAEPLLAHYW SPMPQLTLGA LLRGRATAAL DISDGLLADC GHIAKASGVA LEVNLAQVPV
SPALEAFLGR EAAVRAALTG GDDYVLAFTL PPEALAPLAA FDTIEVHTIG RVLEGQGVTL
RDAQGQDITP VQRGYQHFRE TP
|
|---|
| |