| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0548 |
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| Symbol | |
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| ID | 5868294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 625400 |
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| End bp | 626605 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641545636 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001666795 |
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| Protein GI | 167031564 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCTT CACTGACACG CTGGACAACC CTGTTGCTTG CCATTACCAG CGCCATGGCC
GTCGCGACGG TGTACTTCGC TCAGCCTCTG CTTGAGTCGA TGGCTGCCGA GCTGGGGGTA
GGGCAGCAGC AGATTGGCTG GGTAGTTGGC GCGACCCAGG CGGGCTATGC CCTGGGGTTG
CTACTGATCG TGCCGCTGGG TGACTTGGTC GATCGCAAGC GCCTGTTGCT TGGCCAGTTG
CTGTTCTCGG CTCTGGCGCT GATCGGCGTC GGCATGTCGC AAAGTTGGGC AATGCTGCTG
GTGGCTCTAG CCGTCACCGG GTTGATGGCC GTGATGGTGC AGGTGATGGT GGCGCATGCC
GCGAGCCTGG CCTCACCGGG CCAGCAAGGG CAGGCGGTAG GCGCCGTCAC CAGTGGTGTG
GTGCTGGGCA TTCTGCTTGC GCGCCTGGTC TCGGGCGGGT TGGCCGACCT GGCCGGTTGG
CGCAGCGTGT ACTGGATGGC CGCAGGCGTC TTGATAGTGC TGGCACTGGT GATATGGCGT
AGCTTGCCCT CGGTGCAGCC CGTCATGCAT CGGTCTGGCT ACCGGGCGCT GATTGTGTCC
CAGTTCAACC TGTACCGGCA CGACAGGTTG CTGCGCCAGC GAGGCATGTT TGGAGTGTTG
ATCTTCGCCT CGTTCAGCGT GCTATGGAGT GCCATGGTCA TGCCGCTCAG TGCTGCGCCG
TTGGCGCTGA GCCATACCGA GATCGGCCTG TTCGGCCTGG CAGGTGTCGC GGGTACCTTG
GCAGCTTCGC GTGCCGGTCG TCTGGCTGAC CAGGGGCAGG GTGAACGCAC TACTGGGTTG
GCGCTGGCCT TGCTGACGCT GTCGTGGTTG CCCACGGCGT TTGTCGGGGC TTCACTGATG
GCCTTCGTGC TGGGAGTGCT GATGCTGGAC TTTGCCGTGC AGGCGGTACA TGTCACCAAC
CAGAGCCTGT TGCTGGCCGG GCGTGGCGCG ATGGCCAGCC GGTTGATCGG TGCCTACATG
TGTTGCTACT CGCTTGGCAG CGGGCTGGGA GCGGTGTTGG CGGCCTGGGT GTTTGCCCAT
TGGGGGTGGG TCGCAGTGTG CGGGCTTGGC ATGGCCATCA GCGCGGTAGC GCTGGGCTAC
TGGCTATGGC TGCAACGTGC GAGGGCGGCC GAAGCCGCCC TGCCGTGTTC AGGTCAGAAC
TTGTAG
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| Protein sequence | MAPSLTRWTT LLLAITSAMA VATVYFAQPL LESMAAELGV GQQQIGWVVG ATQAGYALGL
LLIVPLGDLV DRKRLLLGQL LFSALALIGV GMSQSWAMLL VALAVTGLMA VMVQVMVAHA
ASLASPGQQG QAVGAVTSGV VLGILLARLV SGGLADLAGW RSVYWMAAGV LIVLALVIWR
SLPSVQPVMH RSGYRALIVS QFNLYRHDRL LRQRGMFGVL IFASFSVLWS AMVMPLSAAP
LALSHTEIGL FGLAGVAGTL AASRAGRLAD QGQGERTTGL ALALLTLSWL PTAFVGASLM
AFVLGVLMLD FAVQAVHVTN QSLLLAGRGA MASRLIGAYM CCYSLGSGLG AVLAAWVFAH
WGWVAVCGLG MAISAVALGY WLWLQRARAA EAALPCSGQN L
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