| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0546 |
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| Symbol | |
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| ID | 5868292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 623894 |
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| End bp | 624826 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545634 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001666793 |
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| Protein GI | 167031562 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.466316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACG CCCCCATCCT GATCACCGGC GGTGCCGGCT TCATTGGCTC CCACCTGTGC
GATGCGTTGT TGGACAAAGG CTACGCCGTA CGCATTCTTG ATGACTTTTC CACAGGCCGC
AGGAGCAACC TGCAGGTCGA CCACCCACGG TTGGAGCTGA TCGAAGGCGA TGTAGCCGAT
GCCGGGTTGG TTACACAGAC AGCGGCTGGC TGCCGTGCTG TAGTGCACCT GGCGGCGGTG
GCCTCGGTGC AGGCCTCGGT CGAGGACCCG GTACGCACCC ATCAGAGCAA CTTCATCGGC
ACCCTCAATG TTTGTGAAGC CATGCGCGTG CATGGCGTGC GTCGGGTGCT GTTCGCTTCC
AGTGCGGCGG TGTATGGCAA CAATGGCGAG GGCGAGTCGA TTGCCGAAGA GACCCCCAAG
GCGCCGCTGA CCCCCTATGC CGTGGACAAA CTGGCCAGTG AGCAATACCT GGACTTCTAC
CGCCGCCAGC ATGGTCTGGA GCCGGTGGTG TTTCGCTTCT TCAATATTTT CGGGCCACGT
CAGGACCCGT CCTCACCGTA TTCCGGTGTG ATCAGCATTT TCTGCGAGCG CGCTGTACAG
GGCTTGCCGA TCACGGTGTT TGGCGATGGC GAGCAGACCC GTGATTTCCT CTACGTGGGT
GATCTGGTGC AGGTGATGGT GCAAGCATTG GAGCAGCCGC AGGTCGAGGA GGGGGCGGTG
AACATCGGCC TCAACCAGGC GACTTCGCTG AACCAGTTGC TGGCAGCGCT GGAGAAGGTG
GTGGGGAGCT TGCCAGCGAT CAGCTATGTC GCGGCCCGTT CGGGGGATAT TCGCCATTCG
CGGGCGGATA ATCAGCGGTT GCTGGCGCGG TTCAAGTTCG CGCAGGCGAC GCCGATGGTC
GAGGGGCTGG CGCGGCTTCT GGGCAAGGCC TGA
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| Protein sequence | MADAPILITG GAGFIGSHLC DALLDKGYAV RILDDFSTGR RSNLQVDHPR LELIEGDVAD
AGLVTQTAAG CRAVVHLAAV ASVQASVEDP VRTHQSNFIG TLNVCEAMRV HGVRRVLFAS
SAAVYGNNGE GESIAEETPK APLTPYAVDK LASEQYLDFY RRQHGLEPVV FRFFNIFGPR
QDPSSPYSGV ISIFCERAVQ GLPITVFGDG EQTRDFLYVG DLVQVMVQAL EQPQVEEGAV
NIGLNQATSL NQLLAALEKV VGSLPAISYV AARSGDIRHS RADNQRLLAR FKFAQATPMV
EGLARLLGKA
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