Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0525 |
Symbol | |
ID | 5868271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 599225 |
End bp | 600571 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641545613 |
Product | hypothetical protein |
Protein accession | YP_001666772 |
Protein GI | 167031541 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000000539959 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.748785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGAAA CGGATTCTGA GATCAGGGAC AGCATCAGTG CAGAGCCAAC AAAGGCTTTC TTCGTAGATA TGCTTGTCCG GGATATCCCT CTCGAACAGG CAGTGCTCGA TCTTGTCGAT AATTGCGTTG ACGGCGCCAA GAGACTGGCT AAGCAGGCAG AGCAACCGTA TGAAGGCTGC TCGGTGAAAA TTACTCTTGA TCAGACACAT TTCCGCATTT TGGATAACTG CGGAGGCTTT GATATCGAGA CAGCCCGTGA GTACGCGTTT CGATTTGGAC GTCCAGCCGG CGCAAAAGCC ACATCTCACT CCATTGGGCA ATTTGGTGTT GGGATGAAGC GTGCTCTATT CAAATTTGGC CGCCATTTCA ATGTGCAATC AGCCACCTCA AATGAGGCTT GGGCTGTTGA TGTAAATGTT GACGAATGGG AAGCACAATC TGGGTGGAGC TTTCCATGGG CAAAACCTCA AGACAACAGT GTATCAACTG CCTCGCCAGG AACCGATATC AAAGTTACAA AATTAAGACC TGAAGTAGCC CTGAAGTTCG GAACGGCCTG GTTCAGAAAT AGTATAGTTG GGCTGATAAA GTCAAAGCAT CGTCAGTTCA TATCCGACGG CCTACAGATT TCAGTCAATG ATTTTCGCAT TGACGCAACC AACATTTATT TGCTGGTAAG CAATGGCTTT ACACCTGGCA CAGACATACT CACGTTTACA AGCGAAGGTT CAGCTCCGGT AACTGCGAAA ATAATCGTAG GCGTAGGAAC GTCGTCTCCT AAGGAAGCTG GATGGAATGT CATCTGCAAC GGCCGAGTTA TTTTAGAGGC GGACAGACGA GCTGTAACTG GCTGGGGCTT GATTGAAGAG GAAGCAGGAA AAACATTAAT TCCAAGCTTC CACAATCAGT TTGCCAGATT TCGCGGCATA GTATCCTTTG ACTCCGAGGA TTCGTCACAA ATCCCTTGGA ATACAACAAA AACTGATGTA GACCAAGATA GTATTATATG GAGAAAGGCA TTTCAGCGAA TGCTTGAAAT GATGCGCCCT GTAATTGATT TCCTAAATGA ACTTGACGCA GACATTGATG AAAACACCCG CGAAAAAAGC GCCCTATTAG ACTTTGTCAC AAAAGCGTCC CCCCAGCGTC CTGAGTCATT TTCGGTAAAA AAGGACTTCA CTGCTCCCGC CCGAGGGTCG ATAGTTAAGG GCCCTAAAAT GGTTAAGATT CAATACTCCC GGGCCGTGGA TGATGTAACT TTCCTTCAAG ATGCGCTAGG GCTTGGATCG GCCAAGGCTG TTGGCGAGGC ATGCTTTGAT ATGATTTTGA AAAGGCAACG TGACTAA
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Protein sequence | MAETDSEIRD SISAEPTKAF FVDMLVRDIP LEQAVLDLVD NCVDGAKRLA KQAEQPYEGC SVKITLDQTH FRILDNCGGF DIETAREYAF RFGRPAGAKA TSHSIGQFGV GMKRALFKFG RHFNVQSATS NEAWAVDVNV DEWEAQSGWS FPWAKPQDNS VSTASPGTDI KVTKLRPEVA LKFGTAWFRN SIVGLIKSKH RQFISDGLQI SVNDFRIDAT NIYLLVSNGF TPGTDILTFT SEGSAPVTAK IIVGVGTSSP KEAGWNVICN GRVILEADRR AVTGWGLIEE EAGKTLIPSF HNQFARFRGI VSFDSEDSSQ IPWNTTKTDV DQDSIIWRKA FQRMLEMMRP VIDFLNELDA DIDENTREKS ALLDFVTKAS PQRPESFSVK KDFTAPARGS IVKGPKMVKI QYSRAVDDVT FLQDALGLGS AKAVGEACFD MILKRQRD
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