| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0513 |
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| Symbol | |
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| ID | 5868259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 587343 |
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| End bp | 588737 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545601 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001666760 |
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| Protein GI | 167031529 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGACA CCCACAACGA GCGCATGAGT GGCGGCGAAA CCCGCGCCGC TGGCGGCCTT
GCCCTGGTCT TTGCCTTTCG TATGCTGGGC ATGTTCATGG TCTTGCCGGT ACTGGCCACC
TACGGCATGG ACCTGGCCGG CGCCACACCT GCGCTGATCG GCCTGGCCAT TGGTGCCTAT
GGCCTGACTC AGGCGGTACT GCAGATTCCA TTCGGGATGA TTTCCGACCG CATTGGCCGT
CGTCCAGTGA TTTACCTGGG GTTGGTGATC TTCGCCCTCG GCAGTGTGCT GGCAGCCCAG
GCCGACTCCA TCTGGGGCGT GATTGCCGGG CGCATCCTGC AGGGCGCCGG GGCGATTTCT
GCCGCAGTCA TGGCGTTGCT GTCCGACCTC ACCCGCGAAC AACACCGGAC CAAGGCCATG
GCCATGATTG GCATGAGCAT CGGCTTGTCG TTCGCTGTCG CCATGGTCGT CGGCCCCTTG
CTGACAAGTG CCTTTGGTTT GTCAGGTTTG TTCTTCGCCA CGGCAGGGCT TGCCCTGGTT
GGCATAGCGC TGATCGCGTT CGTCGTGCCC AACACCCACA GCATCCTGCA GCACCGCGAG
TCGGGTGTGG CCCGCAAGGC ACTCGGCCCA ACCCTGCGCC ACCCGGACCT TCTGCGCCTG
GACGTGGGCA TCTTCATCCT GCACGCCATC CTCATGGCCA GCTTCGTCGC GCTGCCGCTG
GCCTTCGTCG AGCGTGGCGG CCTGCCCAAG GAAGAGCATT GGTGGGTGTA CCTGACCGCG
CTGTTCATCT CATTTTTTGC AATGGTCCCG TTCATCATCT ACGGCGAAAA AAAGCGCAAG
ATGAAACGCG TGTTGGCTGG CGCGGTCAGT GTCCTGCTGC TGACAGAGAT ATACTTCTGG
GAGTGGGCTG ACGGTTTGCG CGGACTGGTG ATTGGCACCG TGGTATTCTT TACCGCATTC
AACCTGTTGG AGGCTTCGTT GCCTTCGCTG GTGAGCAAGG TGTCGCCTGC CGGTGGCAAG
GGGACGGCGA TGGGGGTGTA TTCCACCAGC CAGTTCCTCG GTGCGGCACT GGGCGGAATC
CTCGGTGGCT GGTTGTTCCA GCACGGTGGG CTGGACACGG TGTTCCTTGG TTGCGCGGTG
CTGTGTGCCA TCTGGCTGAT CGTCGCCTTG CGCATGAACG AGCCGCCGTA TGTGACCAGC
CTGCGTATGC CGCTGACGCC CGAAGCAGTC CGTGAAGCCG GCCTGACCGA GCGCCTGATG
GCCGTGCCGG GTGTGACCGA CGCTGTGGTG GTGGCAGAAG AGGCCGCCAT CTATATCAAA
CTGGATACGA AAATTTTGGA CCGTGCGACC CTCGAGCGAC TGGTGAATCC AGCCTCTTCG
GCGTGCGAAG CCTAG
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| Protein sequence | MHDTHNERMS GGETRAAGGL ALVFAFRMLG MFMVLPVLAT YGMDLAGATP ALIGLAIGAY
GLTQAVLQIP FGMISDRIGR RPVIYLGLVI FALGSVLAAQ ADSIWGVIAG RILQGAGAIS
AAVMALLSDL TREQHRTKAM AMIGMSIGLS FAVAMVVGPL LTSAFGLSGL FFATAGLALV
GIALIAFVVP NTHSILQHRE SGVARKALGP TLRHPDLLRL DVGIFILHAI LMASFVALPL
AFVERGGLPK EEHWWVYLTA LFISFFAMVP FIIYGEKKRK MKRVLAGAVS VLLLTEIYFW
EWADGLRGLV IGTVVFFTAF NLLEASLPSL VSKVSPAGGK GTAMGVYSTS QFLGAALGGI
LGGWLFQHGG LDTVFLGCAV LCAIWLIVAL RMNEPPYVTS LRMPLTPEAV REAGLTERLM
AVPGVTDAVV VAEEAAIYIK LDTKILDRAT LERLVNPASS ACEA
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