| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0504 |
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| Symbol | secY |
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| ID | 5868250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 577606 |
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| End bp | 578937 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641545592 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001666751 |
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| Protein GI | 167031520 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000390206 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGC AAGGTGCTCT CTCTTCGCTC GGTAAGGGCG GGATGTCGGA ACTCTGGGCT
CGTCTGCGCT TTCTGTTCAT GGCGATCATC GTCTATCGGA TAGGTGCGCA TATCCCGGTT
CCCGGCATCA ATCCGGACCG TCTGGCGGAT CTGTTTCGGC AGAATGAGGG GACCATTCTT
AGCTTGTTCA ACATGTTTTC CGGTGGCGCG CTCGAGCGCA TGAGCATCTT TGCACTGGGG
ATCATGCCGT ACATTTCGGC ATCGATCATC ATGCAGCTGA TGACCGCGGT CAGCCCGCAA
CTGGAGCAGT TGAAGAAGGA AGGTGAAGCT GGCCGTCGCA AGATCAGCCA GTACACCCGC
TACGGCACCG TTATCCTGGC ACTGGTTCAA GCCATTGGCA TGTCCATTGG CCTGGCCAAC
CAGGGCGTGG CGTTTTCTGT GGGCCTGGGC TTCCATGTCG TCGCCGTCTC CACCTTCGTG
GCAGGCGCGA TGTTCATGAT GTGGCTGGGC GAGCAGATCA CCGAGCGCGG TGTGGGCAAC
GGTATCTCGA TGTTGATCTT CGCAGGTATC GTTGCCGGTC TTCCGAGAGC AATCGGGCAG
TCTTTCGAGT CTGCACGCAC AGGCGATATC AATATTTTCG CCTTGGTCGC TATCGGTTTG
CTGGCAGTAG CGATTATCGG TTTCGTGGTG TTCATTGAGC GTGGTCAGCG TCGTATCGCC
GTTCACTACG CCAAGCGTCA GCAGGGCCGC AAGGTCTTCG CTGCGCAGAC CAGCCACTTG
CCGTTGAAGG TGAACATGGC GGGGGTTATC CCGGCCATTT TCGCGAGCAG CATTTTGCTG
TTCCCGGCTT CGCTGGGTGC CTGGTTCGGT CAGTCCGAAG GTATGGGCTG GCTGCAGGAC
ATCTCGCAGT CGATCGCTCC TGGTCAGCCG TTGAACATTC TGCTGTTTAG TGCAGGGATC
ATTTTCTTCT GCTTCTTCTA CACAGCATTG ATGTTCAATC CGAAAGACGT AGCGGAAAAC
CTGAAGAAGT CCGGTGCCTT TATTCCGGGT ATCCGTCCTG GTGAGCAGTC GGCGCGCTAC
ATTGATGGCG TTCTGACCCG TTTGACCATG TTCGGTGCTC TTTACATGAT GGCCGTCTGC
CTTCTGCCCC AGTTCCTGGT GGTGGCAGCA AATGTGCCGT TCTACCTTGG CGGGACCTCG
TTGCTGATTG TGGTAGTGGT TGTGATGGAC TTCATGTCCC AAGTACAATC GCACCTCGTT
TCGCACCAGT ACGAATCCCT GATGAAGAAA GCCAACCTGA AAGGCTACGG TGGCAGCGGT
CTGCTGCGCT GA
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| Protein sequence | MAKQGALSSL GKGGMSELWA RLRFLFMAII VYRIGAHIPV PGINPDRLAD LFRQNEGTIL
SLFNMFSGGA LERMSIFALG IMPYISASII MQLMTAVSPQ LEQLKKEGEA GRRKISQYTR
YGTVILALVQ AIGMSIGLAN QGVAFSVGLG FHVVAVSTFV AGAMFMMWLG EQITERGVGN
GISMLIFAGI VAGLPRAIGQ SFESARTGDI NIFALVAIGL LAVAIIGFVV FIERGQRRIA
VHYAKRQQGR KVFAAQTSHL PLKVNMAGVI PAIFASSILL FPASLGAWFG QSEGMGWLQD
ISQSIAPGQP LNILLFSAGI IFFCFFYTAL MFNPKDVAEN LKKSGAFIPG IRPGEQSARY
IDGVLTRLTM FGALYMMAVC LLPQFLVVAA NVPFYLGGTS LLIVVVVVMD FMSQVQSHLV
SHQYESLMKK ANLKGYGGSG LLR
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