| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0501 |
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| Symbol | rpsE |
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| ID | 5868247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 576488 |
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| End bp | 576988 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641545589 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_001666748 |
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| Protein GI | 167031517 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00000260695 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAATA ACGATCAAAA GCGCGACGAA GGCTACATCG AGAAGCTGGT TCAAGTTAAC
CGCGTTGCCA AAACCGTAAA AGGCGGCCGT ATCTTCACCT TCACCGCGCT GACCGTGGTA
GGTGATGGTA AAGGTCGTGT TGGCTTCGGC CGTGGCAAGT CGCGCGAAGT ACCAGCCGCG
ATCCAGAAAG CCATGGAAGC TGCTCGCCGC AACATGATTC AGGTTGACCT GAAGGGCACC
ACCCTGCAGT ACGCCACCAA GGCTGCCCAC GGCGCCTCGA AGGTTTACAT GCAGCCTGCC
TCGGAAGGTA CCGGTATCAT CGCCGGTGGC GCAATGCGTG CTGTCCTGGA AGTTGCTGGT
GTTCAGAACG TTCTGGCCAA GTGCTACGGT TCGACCAACC CAGTGAACGT GGTTTACGCC
ACCTTCAAGG GTCTGAAAGC CATGCAATCT CCTGAATCCA TTGCTGCCAA GCGCGGCAAG
AGCGTCGAGG AGATCTTCTG A
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| Protein sequence | MANNDQKRDE GYIEKLVQVN RVAKTVKGGR IFTFTALTVV GDGKGRVGFG RGKSREVPAA
IQKAMEAARR NMIQVDLKGT TLQYATKAAH GASKVYMQPA SEGTGIIAGG AMRAVLEVAG
VQNVLAKCYG STNPVNVVYA TFKGLKAMQS PESIAAKRGK SVEEIF
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