Gene PputGB1_0472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0472 
SymbolnusG 
ID5868218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp552204 
End bp552737 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content54% 
IMG OID641545560 
Producttranscription antitermination protein NusG 
Protein accessionYP_001666719 
Protein GI167031488 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.030114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAAGC GTTGGTATGT TGTGCATGCT TACTCGGGTT ACGAGAAGCA TGTAATGCGC 
TCCCTGATTG AGCGCGTCAA GCTGGCTGGC ATGGAAGACG GTTTCGGCGA GATCCTGGTC
CCGACCGAAG AAGTCGTCGA AATGCGCAAC GGCCAGAAGC GTAAGAGTGA GCGTAAATTC
TTCCCTGGCT ATGTATTGGT CCAGATGGAG ATGAACGAAG GGACTTGGCA CTTGGTCAAG
GATACCCCTC GTGTGATGGG CTTTATCGGT GGTACTGCAG ATAAGCCTGC GCCGATCACT
GATAAAGAAG CTGAGGCTAT CCTGCGTCGT GTTGCCGACG GCAGCGACAA GCCGAAGCCG
AAGACGCTGT TCGAGCCAGG TGAAGTGGTT CGAGTCATTG ACGGTCCGTT CGCTGACTTC
AATGGTAGTG TCGAAGAGGT TAACTACGAA AAGAGCCGCC TGCAGGTTGC AGTGCTCATT
TTCGGTCGCT CTACTCCGGT GGAGCTCGAG TTCAGCCAGG TCGAAAAGGT CTAG
 
Protein sequence
MAKRWYVVHA YSGYEKHVMR SLIERVKLAG MEDGFGEILV PTEEVVEMRN GQKRKSERKF 
FPGYVLVQME MNEGTWHLVK DTPRVMGFIG GTADKPAPIT DKEAEAILRR VADGSDKPKP
KTLFEPGEVV RVIDGPFADF NGSVEEVNYE KSRLQVAVLI FGRSTPVELE FSQVEKV