Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0472 |
Symbol | nusG |
ID | 5868218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 552204 |
End bp | 552737 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641545560 |
Product | transcription antitermination protein NusG |
Protein accession | YP_001666719 |
Protein GI | 167031488 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.030114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTAAGC GTTGGTATGT TGTGCATGCT TACTCGGGTT ACGAGAAGCA TGTAATGCGC TCCCTGATTG AGCGCGTCAA GCTGGCTGGC ATGGAAGACG GTTTCGGCGA GATCCTGGTC CCGACCGAAG AAGTCGTCGA AATGCGCAAC GGCCAGAAGC GTAAGAGTGA GCGTAAATTC TTCCCTGGCT ATGTATTGGT CCAGATGGAG ATGAACGAAG GGACTTGGCA CTTGGTCAAG GATACCCCTC GTGTGATGGG CTTTATCGGT GGTACTGCAG ATAAGCCTGC GCCGATCACT GATAAAGAAG CTGAGGCTAT CCTGCGTCGT GTTGCCGACG GCAGCGACAA GCCGAAGCCG AAGACGCTGT TCGAGCCAGG TGAAGTGGTT CGAGTCATTG ACGGTCCGTT CGCTGACTTC AATGGTAGTG TCGAAGAGGT TAACTACGAA AAGAGCCGCC TGCAGGTTGC AGTGCTCATT TTCGGTCGCT CTACTCCGGT GGAGCTCGAG TTCAGCCAGG TCGAAAAGGT CTAG
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Protein sequence | MAKRWYVVHA YSGYEKHVMR SLIERVKLAG MEDGFGEILV PTEEVVEMRN GQKRKSERKF FPGYVLVQME MNEGTWHLVK DTPRVMGFIG GTADKPAPIT DKEAEAILRR VADGSDKPKP KTLFEPGEVV RVIDGPFADF NGSVEEVNYE KSRLQVAVLI FGRSTPVELE FSQVEKV
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