| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0440 |
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| Symbol | |
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| ID | 5868179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 514107 |
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| End bp | 516494 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641545521 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001666687 |
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| Protein GI | 167031456 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGAG TGCGTCGCCT GTTGGTTATC GGCTGTTTGT GGCTGCCCTT GATTGCATTG
GCCAGGCCCG AGGCGCCGCC CGCCGTGGTA TTGGAGCCCG CTCAGCAGCA GTGGCTGGAT
ACCCATCGCA GCCTGCGGGT GGGCCTGGTG CTGCAGGTGC CGTACGCCCA GTTCGACCGG
CGCTTGCAGC AACTGTACGG GGCCAACGTA GAGCTGGTGA GCAGCCTGGC GCAGGTGCTG
CGGCTGGACC TCACCTGGCG CAACTTCAGC GACCAGGCCA GCCTGGAGCA TGCCCTGCAG
AGCGGCGAAA TCGACTTCGC CCCTGGGCTT ACGCAGACGC CGGCCAGCCT GCGCCTGTGG
TTGTTCAGCG ACCCATACAT GCGTGTGCCG CAACTGGTGG TGGGGCCGCG CACCGGGGCC
ATGGCCGTGG AGCTGGAAAA ACTCGAAGCC GAACAGCGGG TGGCCGTGCG CATGCCCAGC
CAGCTGGCGG ACTACCTGCG CGCCAACTAC AGCAACCTCA ACCTGCAGGG GGTGCCCAAC
GAGCGTGAGG CCCTGCAACT GGTGGTAGGC GGCCAGGCCG CCTTTGCGGT GCTGGATGAA
GCGCAGCTCA GCCGTCTGTC ACGCGAAAGC GAGTTCAGTG AGCTGGCAGT GGTCGGCGAT
ATCGGCCTGC CGCAATTGCT GCGCATTGGT TCCCGGCGCG ACTGGCCACT GTTGGCCGAT
GTATTGGAGC GTGGCTTGCA AGCGCTGCCA GCCAAGGAGC TGGAACAACT GCACCAGCGT
TGGTTACAGC CCAAATACCC ACGGCTGAGT GAATCGCCGG GCTTCTGGCA GAACCTGGCC
TTGTTGTTCG GCATGCTGCT GCTGTGCGCG TTGGCCACAT TGCTATGGCA ACGCCGGCAG
CAGCGCCAGC TGGAGCGCAG CCTGTTGGCC ACGCGAGAAA GCCTTGTGGA ACGGCAGGTG
CGCGAAGAGG CGTTGCGCTT GAGCCAGTTC GCCATCGACC AGAGTACGGT GGGTATCCTT
TGGGTCAATT GGGACAGCCA CGTGCGCTAC GCCAACCACG CTGCCGAGCG CATGCTGGGT
TATGCCGAGG GCGAGCTGCT GGAGCGGCCG CTGAGTACCT TCGAACCAAG CCTGAACATG
GACCGCTGGC TGGAGCTGTG GAAGGGCGCG CGTACGGGGG CAGGGGGTAC CGGCCAGTTC
GAGGCGCAGT GCCGGCGGGC CGATCACAGC GTGCTGCCGG TGGAGCTGTC GCTGAGTTTT
CTGCGCTTTC GTGATTCCGA ATATCTGGTG GTCTATCTCG CCGACGTCAC CGAGCGCCAC
CGCGCCCTGG CGGCCTTGCG CGAGAGCGAG GCACGGCTCA AGGGCATTGC CGGTAACGTG
CCGGGGCTGG TGTTTCGTCT GGAGCGCGAC CCAGCCGAGG GCGACCTGGA GTTCCCCTAT
ATCAGTGAGG GCAGCGAGGC CCTGGTGGGC TATGCGCCCA GCGAGATTCA GCACCCGCAG
ATGGGCCTGC GCAACCTGGT GCACCCCGAG GACCGCGCCG ATTACCATCG GGTACAGGAC
CTGGCCCTGG CCAGCGACCA GGACTGGTCC TGGCAGGGGC GCATCCTCAC TCGCCAGGGT
GAACAGCGCT GGGCCGACAT CAAGGCCAGT ACTCGGCGCC TGGGCAACGG CCAGGTGGTG
TGGGACGGTG TGGTGTGGGA CATCACCCAA GGCAAGCGGG CAGAGTTGGC CCTGGCGAAA
TCTCAGGAGC AGCTGCGCGA ACTGTCGGCC CACCTGGAGA GCGTGCGTGA AGAAGAAAAG
GCCCGTATCG CCCGGGAAGT GCACGACGAA CTGGGGCAGA TGCTGACCGT GCTCAAGCTG
GAAGTGTCGA TGTGCGAGCT GGCATTCGCC GAGCTGGACC CAGGCCTTAA CGAACGCCTG
AGCAGCATGA AGCGCCTGAT CGCGCAGCTG TTCCAGCTGG TGCGCGATGT GGCCACCGCT
TTGCGCCCGC CGATTCTCGA TGCCGGTATT GCCTCGGCCA TCGAATGGCA GGCGCGGCGC
TTCGAGGCGC GCACGCAAAT CCCCTGTCTG GTGCAAGTAC CGGATAATCT GCCAGCATTG
AGCGATGCCA AGGCCACTGG ATTGTTTCGT ATCCTGCAGG AGGCGCTGAC CAACGTGATG
CGTCACGCCC AGGCGCACAG CGTGGAGATC GAGCTGGTAC GCCAGGACGG TCAGTTGCGC
ATGACGGTCA GTGACGACGG CCAGGGCTTT TGCCGCGACC AGCCCCGGCC CACCTCGTTT
GGCCTGGTGG GTGTGCGCGA GCGCGTGCTG ATGTTGGGTG GCAGCATGGC GCTGGACAGT
CAACCGGGCG AGGGCACCAG CCTGAGCGTG GCCATTCCGT TGGAGTAG
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| Protein sequence | MKRVRRLLVI GCLWLPLIAL ARPEAPPAVV LEPAQQQWLD THRSLRVGLV LQVPYAQFDR
RLQQLYGANV ELVSSLAQVL RLDLTWRNFS DQASLEHALQ SGEIDFAPGL TQTPASLRLW
LFSDPYMRVP QLVVGPRTGA MAVELEKLEA EQRVAVRMPS QLADYLRANY SNLNLQGVPN
EREALQLVVG GQAAFAVLDE AQLSRLSRES EFSELAVVGD IGLPQLLRIG SRRDWPLLAD
VLERGLQALP AKELEQLHQR WLQPKYPRLS ESPGFWQNLA LLFGMLLLCA LATLLWQRRQ
QRQLERSLLA TRESLVERQV REEALRLSQF AIDQSTVGIL WVNWDSHVRY ANHAAERMLG
YAEGELLERP LSTFEPSLNM DRWLELWKGA RTGAGGTGQF EAQCRRADHS VLPVELSLSF
LRFRDSEYLV VYLADVTERH RALAALRESE ARLKGIAGNV PGLVFRLERD PAEGDLEFPY
ISEGSEALVG YAPSEIQHPQ MGLRNLVHPE DRADYHRVQD LALASDQDWS WQGRILTRQG
EQRWADIKAS TRRLGNGQVV WDGVVWDITQ GKRAELALAK SQEQLRELSA HLESVREEEK
ARIAREVHDE LGQMLTVLKL EVSMCELAFA ELDPGLNERL SSMKRLIAQL FQLVRDVATA
LRPPILDAGI ASAIEWQARR FEARTQIPCL VQVPDNLPAL SDAKATGLFR ILQEALTNVM
RHAQAHSVEI ELVRQDGQLR MTVSDDGQGF CRDQPRPTSF GLVGVRERVL MLGGSMALDS
QPGEGTSLSV AIPLE
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