Gene PputGB1_0438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0438 
Symbol 
ID5868177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp512144 
End bp512911 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content67% 
IMG OID641545519 
Productheat shock protein DnaJ domain-containing protein 
Protein accessionYP_001666685 
Protein GI167031454 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1076] DnaJ-domain-containing proteins 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTGGC CAGGCACGGT GATTGGTGTG GGTGCCGGCT TTGCTGTCGC GAGCATACCG 
GGTGCCTTGC TCGGTGCGCT GCTTGGGCAG GCCATGGACC GCCGGCTGCG CTTGCAAGGC
TGGGACGATA TGCGCGAACG CCTGGGCGGG CGCTCGGCCT TGCGCGACGA CGAGTTGCTG
TTCGTGATGC TCGGGCGCCT GGCCAAGTGC GATGGTCGGG TGGGTGAGCT GCATATCCAG
CAGGCGCGTC AGGAAATGGT GCGCCTGGAC CTGGCCGAGG CAGCCCGGCT GCGCGCTATC
AATGCGTTCA ACCGCGGCAA GGCAGGCAAG GACCGGCTGG GCGGGCACCT GCGGCGTATC
CGCCAGCAGC CGCATGCCGC GGAAGGCACC TTGCGTGCCT GTTGGCGCAT GGTTTGGGCC
GACGGCAAGA TGGGCAACAA GGAGCGTGAG TTGTTGCTGG ACTGGGGGCA GAAGCTGGGC
ATGAGCAGGC GCCAGGTGCA GGCCATGTCG CTGGAGTACG AGCCGCGCAA GGCGACGGCA
GCCGAAGGCG TCCCCATGAC CTATGCGGCA GCGTTGCGCT TGCTGGCGGT GGAGGCGGAT
ACCGATAGTG ACAAGGTCAA GCAGGCGTAT CGTCGGCTTG TCAGTCGGCA TCACCCGGAC
AAACTGGCGG GTACCGGTGC CAGCGACGCG CAGGTGCGTG AAGCGACCGA GCGTACCCGT
GAGTTGCATC AGGCGTATGC CATGATCCGC AAGCGGCGGG GGCTGTAA
 
Protein sequence
MWWPGTVIGV GAGFAVASIP GALLGALLGQ AMDRRLRLQG WDDMRERLGG RSALRDDELL 
FVMLGRLAKC DGRVGELHIQ QARQEMVRLD LAEAARLRAI NAFNRGKAGK DRLGGHLRRI
RQQPHAAEGT LRACWRMVWA DGKMGNKERE LLLDWGQKLG MSRRQVQAMS LEYEPRKATA
AEGVPMTYAA ALRLLAVEAD TDSDKVKQAY RRLVSRHHPD KLAGTGASDA QVREATERTR
ELHQAYAMIR KRRGL