Gene PputGB1_0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0426 
Symbol 
ID5868165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp497517 
End bp499085 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content59% 
IMG OID641545507 
ProductSpoVR family protein 
Protein accessionYP_001666673 
Protein GI167031442 
COG category[S] Function unknown 
COG ID[COG2719] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.375889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA GAGCACAGAG ACGCCAACCC ATTTCCACCG GGTCCGAGTG GACGTTCGAG 
CTGATCCAGA CCTACGACCG GGAAATCAGC CGCCTGGCCG AGCGTTACGC CCTGGACACC
TACCCCAACC AGATCGAGGT CATCACTGCC GAGCAGATGA TGGACGCCTA CGCCTCGGTC
GGCATGCCGC TGGGCTATCA CCACTGGTCC TACGGCAAGC AGTTCCTCAG TACCGAAAAG
TCCTACAGTC GCGGCCAGAT GGGCCTGGCC TACGAGATCG TGATCAACTC CGACCCGTGC
ATCGCCTACC TGATGGAAGA AAACACCATG TGCATGCAAG CACTGGTGAT CGCTCACGCC
TGCTATGGCC ATAACAGTTT TTTCAAAGGC AATTACCTGT TCCGCACCTG GACTGACGCC
AGTTCGATCA TCGACTACCT GGTGTTCGCC AAGCAGTACA TCGCCCAATG CGAAGAGCGC
CACGGCATCG ATGCGGTGGA AGACCTGATT GACTCCTGCC ACGCGCTGAT GAACTACGGC
GTCGACCGCT ACAAGCGGCC TTACCCTATT TCCGCCGAGG AGGAGCGGCG CCGGCAACAG
GAGCGCGAAG AGCACCTTCA GCGCCAGATC AACGACCTGT GGCGGACAAT TCCGAAAAGC
GCGGAAAAGG GCAACGACCG CGATGATGGG CGCTTCCCCG CCGAACCGCA GGAAAACATC
CTGTACTTCA TCGAAAAGAA CGCGCCGTTG CTCGAACCTT GGCAGCGTGA AGTGGTGCGC
ATCGTGCGCA AGATCGCCCA GTACTTCTAC CCGCAGCGCC AGACCCAGGT GATGAACGAA
GGCTGGGCAA CCTTCTGGCA TTACACCCTG ATGAACGACC TGTACGACGA GGGGCTAATC
ACCGAAGGCT TCATGATGGA GTTTTTGCAG TCGCACACCA GCGTGGTGTT CCAGCCCGGT
TTCGACAGCC CCTACTACAG CGGCATCAAC CCCTATGCTT TGGGGTTCGC GATGTACACC
GACATCCGCC GCATGTGCGA AAACCCGACC GAGGAAGATC GCCACTGGTT TCCCGACATT
GCCGGCAGTG ACTGGCTTTC TACCATCAAG TTCGCCATGA GCAGCTTCAA GGACGAGAGC
TTCATCCTGC AGTACCTGTC ACCCAAGGTA ATGCGCGACC TGAAGCTGTT CAGCATCCTC
GATGACGACC AGCGCGACGA CCTACTGGTG CCTGCCATTC ATGACGAAGC CGGCTACCGG
GTGATTCGTG AGCAGCTGGC AGCACAATAC AACCTGGGCA ACCGTGAGCC GAACGTGCAG
ATCTGGAGCG TCGACCGTCG CGGCGACCGC TCACTGACCC TGCGCCACCA GCAACATAAC
CGCAAACCAC TGGGCGACTC GACCGATGAA GTGCTCAAGC ACCTGCATCG CTTGTGGGGC
TTCGATATTC ACCTGGAGAC CGTACAGGGC GAGCAAGTGA TGAAAACCCA CCACATGCCC
CCGCGCGGCG AGCACGGCGA AAGCGCCGAC TATGGCCGCA TGGACCTGGC CGTTATCCAC
CATCTCTGA
 
Protein sequence
MTARAQRRQP ISTGSEWTFE LIQTYDREIS RLAERYALDT YPNQIEVITA EQMMDAYASV 
GMPLGYHHWS YGKQFLSTEK SYSRGQMGLA YEIVINSDPC IAYLMEENTM CMQALVIAHA
CYGHNSFFKG NYLFRTWTDA SSIIDYLVFA KQYIAQCEER HGIDAVEDLI DSCHALMNYG
VDRYKRPYPI SAEEERRRQQ EREEHLQRQI NDLWRTIPKS AEKGNDRDDG RFPAEPQENI
LYFIEKNAPL LEPWQREVVR IVRKIAQYFY PQRQTQVMNE GWATFWHYTL MNDLYDEGLI
TEGFMMEFLQ SHTSVVFQPG FDSPYYSGIN PYALGFAMYT DIRRMCENPT EEDRHWFPDI
AGSDWLSTIK FAMSSFKDES FILQYLSPKV MRDLKLFSIL DDDQRDDLLV PAIHDEAGYR
VIREQLAAQY NLGNREPNVQ IWSVDRRGDR SLTLRHQQHN RKPLGDSTDE VLKHLHRLWG
FDIHLETVQG EQVMKTHHMP PRGEHGESAD YGRMDLAVIH HL