Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0426 |
Symbol | |
ID | 5868165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 497517 |
End bp | 499085 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641545507 |
Product | SpoVR family protein |
Protein accession | YP_001666673 |
Protein GI | 167031442 |
COG category | [S] Function unknown |
COG ID | [COG2719] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.375889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCCA GAGCACAGAG ACGCCAACCC ATTTCCACCG GGTCCGAGTG GACGTTCGAG CTGATCCAGA CCTACGACCG GGAAATCAGC CGCCTGGCCG AGCGTTACGC CCTGGACACC TACCCCAACC AGATCGAGGT CATCACTGCC GAGCAGATGA TGGACGCCTA CGCCTCGGTC GGCATGCCGC TGGGCTATCA CCACTGGTCC TACGGCAAGC AGTTCCTCAG TACCGAAAAG TCCTACAGTC GCGGCCAGAT GGGCCTGGCC TACGAGATCG TGATCAACTC CGACCCGTGC ATCGCCTACC TGATGGAAGA AAACACCATG TGCATGCAAG CACTGGTGAT CGCTCACGCC TGCTATGGCC ATAACAGTTT TTTCAAAGGC AATTACCTGT TCCGCACCTG GACTGACGCC AGTTCGATCA TCGACTACCT GGTGTTCGCC AAGCAGTACA TCGCCCAATG CGAAGAGCGC CACGGCATCG ATGCGGTGGA AGACCTGATT GACTCCTGCC ACGCGCTGAT GAACTACGGC GTCGACCGCT ACAAGCGGCC TTACCCTATT TCCGCCGAGG AGGAGCGGCG CCGGCAACAG GAGCGCGAAG AGCACCTTCA GCGCCAGATC AACGACCTGT GGCGGACAAT TCCGAAAAGC GCGGAAAAGG GCAACGACCG CGATGATGGG CGCTTCCCCG CCGAACCGCA GGAAAACATC CTGTACTTCA TCGAAAAGAA CGCGCCGTTG CTCGAACCTT GGCAGCGTGA AGTGGTGCGC ATCGTGCGCA AGATCGCCCA GTACTTCTAC CCGCAGCGCC AGACCCAGGT GATGAACGAA GGCTGGGCAA CCTTCTGGCA TTACACCCTG ATGAACGACC TGTACGACGA GGGGCTAATC ACCGAAGGCT TCATGATGGA GTTTTTGCAG TCGCACACCA GCGTGGTGTT CCAGCCCGGT TTCGACAGCC CCTACTACAG CGGCATCAAC CCCTATGCTT TGGGGTTCGC GATGTACACC GACATCCGCC GCATGTGCGA AAACCCGACC GAGGAAGATC GCCACTGGTT TCCCGACATT GCCGGCAGTG ACTGGCTTTC TACCATCAAG TTCGCCATGA GCAGCTTCAA GGACGAGAGC TTCATCCTGC AGTACCTGTC ACCCAAGGTA ATGCGCGACC TGAAGCTGTT CAGCATCCTC GATGACGACC AGCGCGACGA CCTACTGGTG CCTGCCATTC ATGACGAAGC CGGCTACCGG GTGATTCGTG AGCAGCTGGC AGCACAATAC AACCTGGGCA ACCGTGAGCC GAACGTGCAG ATCTGGAGCG TCGACCGTCG CGGCGACCGC TCACTGACCC TGCGCCACCA GCAACATAAC CGCAAACCAC TGGGCGACTC GACCGATGAA GTGCTCAAGC ACCTGCATCG CTTGTGGGGC TTCGATATTC ACCTGGAGAC CGTACAGGGC GAGCAAGTGA TGAAAACCCA CCACATGCCC CCGCGCGGCG AGCACGGCGA AAGCGCCGAC TATGGCCGCA TGGACCTGGC CGTTATCCAC CATCTCTGA
|
Protein sequence | MTARAQRRQP ISTGSEWTFE LIQTYDREIS RLAERYALDT YPNQIEVITA EQMMDAYASV GMPLGYHHWS YGKQFLSTEK SYSRGQMGLA YEIVINSDPC IAYLMEENTM CMQALVIAHA CYGHNSFFKG NYLFRTWTDA SSIIDYLVFA KQYIAQCEER HGIDAVEDLI DSCHALMNYG VDRYKRPYPI SAEEERRRQQ EREEHLQRQI NDLWRTIPKS AEKGNDRDDG RFPAEPQENI LYFIEKNAPL LEPWQREVVR IVRKIAQYFY PQRQTQVMNE GWATFWHYTL MNDLYDEGLI TEGFMMEFLQ SHTSVVFQPG FDSPYYSGIN PYALGFAMYT DIRRMCENPT EEDRHWFPDI AGSDWLSTIK FAMSSFKDES FILQYLSPKV MRDLKLFSIL DDDQRDDLLV PAIHDEAGYR VIREQLAAQY NLGNREPNVQ IWSVDRRGDR SLTLRHQQHN RKPLGDSTDE VLKHLHRLWG FDIHLETVQG EQVMKTHHMP PRGEHGESAD YGRMDLAVIH HL
|
| |