| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0378 |
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| Symbol | |
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| ID | 5868116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 439949 |
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| End bp | 442381 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641545458 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001666625 |
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| Protein GI | 167031394 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.177868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGTG CCGTAGATCG TATCCTGCGC CCCAGCCTGA TGGCCCTGGC CATCGCCGTG
GCCGCACCGC TGGCCAGCAC TGCCTTGTTC GCCGCCGAGC AGTCCGCTCC GCGCGCCTAC
AACCTGCCCA GCGCGCCACT GGCCACCACC CTCAACCAGA TCGCCAGCCA GGCCGGTATT
GCCTTGGCCA TCGACCCGGC ACTGGTCAGC GGCCGCTCCT CGGCCCCGGT AAGCGGCCAG
TACGACGGCC TCGGCGCCCT GCAAGCCGCC CTGCGCGGTA CTGGCCTGCA GTTGCAACAG
AGCAGCGCGG GCAGCTACAG CCTGGTGGCC GTCCCGGATG GCACCCTGGC GCTACCAGAA
ACCACAGTAG ACGCGGCGAG CGTTTCTGAA AGCGCCTGGG GCCCGGTAGA CGGATACCTG
GCCAAGCGCA CCGCCGCTGG CACCAAGACC GATACCGCGC TGGTCGAAGT CCCTCGCTCC
ATTTCCGTCG CCACTCGCGA GCAGATGAAA GACCGCGGCG TGCACAGCCT GGATGATGCC
GTGCGCTACA TGCCTGGCAT CGTGTCCGCC AGCTTCGGCA GCGACACGCG CTACGACTGG
ATGCGCGTGC GCGGTTTCGA GCCCACTCAG TTCCTCGACG GCCTGCCACT GCCACGCGGT
GTGTACGCCA ACCCGAAAGC CGAAACCTGG AACCTCGACC GCCTTGCCCT GTTGCGCGGC
CCGGCGTCCT CGCTGTATGG CCAGACCCCA CCCGGCGGCC TGCTGGACAT GGTCAGCCGT
CGCCCACAAG CAGAAAGCGA GCATGAGATC GAACTGCAGT ACGGCAGCGA CAACCATCGC
CAGATCAACT TCGCCAGCAC CGGCAAAATC GACGATGATG GCCGCTTTCT GTATGGCGTC
AGTGGGGTAA TCCGCGACGG CGGCACGCAG ATCGACCACA TCGACGACAA GCGCTACAAC
ATTGCCCCGA GCCTGACCTG GAACATCGAC GAGGACACGA CGCTGACCTT GCTCACCCAG
TTCACCCGCG ACGATACCGG TGCCACCAGC CAGTTCCGCC CTATCCAGGG CACCAAGATC
GACATGCCAT TCGGCAAGAT CTCGCACCAC AAGAACCTCG GTGACCCGGA CTACGAGTTC
TACGACCGCA CCTATTACGC GCTGGGCTAT GCCTTCGAGC ACCGTATCAA CGACGTCTGG
CAGTTCCGTC AGAACCTGCG CTACACCAAG ACGGACTTGT CGTTCCAGAC CATCACGCCC
GGCAGCTATT ACGAGCCCGG TGGCCCGGTG AAAGACGATG GCACGGTCAG CCGCATGTCC
ACCAACACGG ACGAAGACAT CAGCCAGTTC GCCGTGGACA ACAACTTCCA GGCCGACTTC
ACCACTGGCG ACATCAGCCA CACCCTGCTG CTCGGCCTGG ACCACCAGCG CATCAACACC
AATTACCTGT CGATCTTCGG CTTCAACGTG CCGGACAGCA ATGTCATCAA CCCGGTCTAC
GGGGTGCCAA TCACTCGCCC GGACCGCTCC ACGGCGTTCT ACGACTACAA CCAGAAATCC
CGTCAGACCG GCTTGTATGT CCAGGACCAG ATGGCGCTTG GCAACTGGCG CCTGACCTTG
GGCGGTCGTG AGGACTGGGT GCATACCGGT ACCAAGTACT TCAACCAGGG CGATGCCACC
AATACCCAGC GCGACAAGAA GTTCAGCGGC AACGCGGCCA TCAGCTATGT CTTCGATTCG
GGCTTCGTGC CGTACCTGTC GTATGCCGAG TCGTTCCAAC CTACCAGCAA TGCCAGCGCT
TCAGCGACCG AGTCGCTCAA GCCGACCGAA GGCCAGCAGT GGGAGCTGGG CATCAAGTAC
CAACCACCGG GCTCCAACAC CCTGCTGTCG GCAGCCGTGT ATGACCTGAC CCAGAAGAAC
GTCTCGGTCA CCAACAACGT CGGTGGCGTA ACCGTCACCA GCCAGACCGG CGAAGTGAAA
GTTCACGGCC TGGAGCTTGA AGCGGTTTCC GACGTTACCG AAAACCTGAA AGTGATTGCC
GCTTACACCC TGGCAAAATC TGAAGTACAG GACGGCCTGT ACAAAGGCAA CCGCCTCCAG
CTGATGCCGA ACCAGCAAGC CTCGGTATGG GGTGACTACA CCTGGCACTC CGGCGTGCTC
GACGGCTTTG GCATTGGCCT AGGCGCGCGT TACACCGGCA ATACCTATGG CGACCAAGGC
AATACCTACC TGGGCAAGGC CAAGGCCTAC ACGGTGTTCG ATGCATCCGT GCACTACGAT
CTGGGTCGCC TGGACACCAG CCTGAAGGGC GCGTCGGTGG CGGTCACTGC CACCAACCTG
TTGAATAAGG ATTACCTCTC TACCTGTGAC TCGTACTACT GCTACTACGG CGATGAGCGC
AGCGTTGTCG CCAGCGCCAC TTACAAGTTC TGA
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| Protein sequence | MSRAVDRILR PSLMALAIAV AAPLASTALF AAEQSAPRAY NLPSAPLATT LNQIASQAGI
ALAIDPALVS GRSSAPVSGQ YDGLGALQAA LRGTGLQLQQ SSAGSYSLVA VPDGTLALPE
TTVDAASVSE SAWGPVDGYL AKRTAAGTKT DTALVEVPRS ISVATREQMK DRGVHSLDDA
VRYMPGIVSA SFGSDTRYDW MRVRGFEPTQ FLDGLPLPRG VYANPKAETW NLDRLALLRG
PASSLYGQTP PGGLLDMVSR RPQAESEHEI ELQYGSDNHR QINFASTGKI DDDGRFLYGV
SGVIRDGGTQ IDHIDDKRYN IAPSLTWNID EDTTLTLLTQ FTRDDTGATS QFRPIQGTKI
DMPFGKISHH KNLGDPDYEF YDRTYYALGY AFEHRINDVW QFRQNLRYTK TDLSFQTITP
GSYYEPGGPV KDDGTVSRMS TNTDEDISQF AVDNNFQADF TTGDISHTLL LGLDHQRINT
NYLSIFGFNV PDSNVINPVY GVPITRPDRS TAFYDYNQKS RQTGLYVQDQ MALGNWRLTL
GGREDWVHTG TKYFNQGDAT NTQRDKKFSG NAAISYVFDS GFVPYLSYAE SFQPTSNASA
SATESLKPTE GQQWELGIKY QPPGSNTLLS AAVYDLTQKN VSVTNNVGGV TVTSQTGEVK
VHGLELEAVS DVTENLKVIA AYTLAKSEVQ DGLYKGNRLQ LMPNQQASVW GDYTWHSGVL
DGFGIGLGAR YTGNTYGDQG NTYLGKAKAY TVFDASVHYD LGRLDTSLKG ASVAVTATNL
LNKDYLSTCD SYYCYYGDER SVVASATYKF
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