| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0357 |
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| Symbol | |
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| ID | 5868095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 412309 |
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| End bp | 413658 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641545437 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001666604 |
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| Protein GI | 167031373 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.183416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.510995 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACC CACCCAGCTC CGCCCCCGCC CAGCTTCGCC GTGTCCTCGG CCTGCCCGCC
CTGGTATTTT TCGGCCTGGT CTACATGGTC CCACTGACCA TCTTCACCAC CTACGGCATC
GTCACCGAAC TCACGGGGGG CCGCACTGCC GGCGCCTACC TGGTCACCCT GGTGGCCATG
CTGTTCACCG CGGCGTCCTA CAGCTTCATG GTCAAGCGCT TCCCGGTCGC GGGCTCGGCG
TACTCCTACA CCAACATGGC GTTCGGGCCC AATATCGGCT TCCTCGCCGG TTGGTCGCTG
CTGCTCGACT ACCTGTTCCT GCCGATGATC AACTACTTGC TGATCGGGCT GTTCCTCAAC
ATCGCCTTCC CCGCAGTGCC CACCTGGGCC TTCGTGCTCG CCTGCATTGC CCTAGTGACA
GTGCTGAACG TGGTCGGCAT CAACTCGGTG GCCAAGACCA GCAACCTGAT CGTTGGCGCG
CAGATCGTGT TCATCGGCGT GTTTGTCGCG CTGTCCTGCC AGACATTGGC TGGCCAGCCG
CTCGACCTGC TGTCGCCGCT GCTGGGTGAC GGCAGCAAAC CGGGCTTCGG CCACCTGATG
GCTGGCGCAG CGGTGTTGTG CTTGTCGTTT TTGGGCTTCG ACGCCGTCTC GACCTTGGCC
GAAGAATGCC GCGACGCCCG CCGCGACGTG CCACGGGCGA TCATCCTCAC CACCCTGTTT
GCCGGTTTGC TGTTCACCGT GCTGGCCTAT GTCAGCCAGC TGGTGTTGCC GGGTAGCAGC
TTCGCCAATG CCGATGCGGC AGCCAACGAA GTGATGTTCA AGGCGGGCGG GCAGTTCCTC
ACCAACTTCT TCACCGCCGC GTATGTTGCG GGCAGCCTGG GTTCGGCGCT GGCTTCGCAG
GCAGCGGTGT CGCGCATTCT GTTCACCATG GGCCGTGACA ACGTGCTGCC ACGGCGTAGC
TTCGGTTACC TGTCGCCGCG CTTTGGCACG CCGGTGTTCG CCATTGCGTT GGTGTCGGCG
TTCTCGCTGC TGGCGCTGGT GATCGACCTG TCCACCCTCG CCTCGCTGAT CAGCTTTGGC
GCACTGGTGG CGTTCTCGGC GGTGAACCTG GCGGTGGTGA AAACTCATCT GATGGACGAC
ACCAGCCAGC GCAATGCCAA GAACCTGCTG CGCTACGGTG TGGTGCCATT GGTGGGGTTG
GGGCTGACCT TGTGGCTGTG GACCAGCCTG TCGGCGCTGA CGCTGGTGAT TGGCCTGTGC
TGGTTTGCGC TAGGCCTTGT GTACCTTGCC GTACTGACCG CAGGCTTCCG CCGCCCGGTG
CACCTGGTGG ATTTCACCGA AGCGGCCTGA
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| Protein sequence | MANPPSSAPA QLRRVLGLPA LVFFGLVYMV PLTIFTTYGI VTELTGGRTA GAYLVTLVAM
LFTAASYSFM VKRFPVAGSA YSYTNMAFGP NIGFLAGWSL LLDYLFLPMI NYLLIGLFLN
IAFPAVPTWA FVLACIALVT VLNVVGINSV AKTSNLIVGA QIVFIGVFVA LSCQTLAGQP
LDLLSPLLGD GSKPGFGHLM AGAAVLCLSF LGFDAVSTLA EECRDARRDV PRAIILTTLF
AGLLFTVLAY VSQLVLPGSS FANADAAANE VMFKAGGQFL TNFFTAAYVA GSLGSALASQ
AAVSRILFTM GRDNVLPRRS FGYLSPRFGT PVFAIALVSA FSLLALVIDL STLASLISFG
ALVAFSAVNL AVVKTHLMDD TSQRNAKNLL RYGVVPLVGL GLTLWLWTSL SALTLVIGLC
WFALGLVYLA VLTAGFRRPV HLVDFTEAA
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