| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0344 |
|---|
| Symbol | |
|---|
| ID | 5868084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 398431 |
|---|
| End bp | 399471 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641545426 |
|---|
| Product | threonine aldolase |
|---|
| Protein accession | YP_001666593 |
|---|
| Protein GI | 167031362 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2008] Threonine aldolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATA AGAGCCAACA ATTCGCCAGC GACAACTATT CCGGTATCTG CCCCGAAGCC
TGGGCAGCGA TGGAGAAGGC CAACCACGGC CACGACCGCG CCTATGGCGA CGATCAGTGG
ACCGAGCGCG CCTCGGAATA CTTCCGCAAC CTGTTCGAAA CCGACTGCGA GGTGTTCTTC
GCCTTCAACG GAACTGCCGC CAACTCCCTG GCCCTGGCCT CGCTGTGCCA GAGCTACCAC
AGCGTGATCT GCTCCGAGAC CGCCCACGTC GAAACCGATG AATGCGGCGC GCCGGAGTTC
TTCTCCAACG GCTCCAAACT GCTGACGGCG GCCAGCGTCA ACGGCAAGCT GACGCCGCAG
TCGATCCGCG AAGTGGCGCT CAAGCGCCAA GACATCCACT ACCCCAAGCC CCGCGTGGTG
ACCATTACCC AGGCCACTGA AGTGGGCACG GTGTACCGCC CCGACGAGCT GAAGGCGATC
AGCGCCACCT GCAAGGAGCT GGGCCTGAAC CTGCACATGG ACGGCGCGCG CTTTACCAAT
GCCTGCGCGT TCCTGGGCTG CAGCCCGGCC GAGCTGACCT GGAAGGCCGG CGTCGATGTG
CTGTGCTTTG GCGGCACCAA GAACGGCATG GCGGTGGGTG AGGCGATCCT GTTCTTCAAC
CGCCAGCTGG CCGAAGACTT CGACTACCGC TGCAAGCAAG CCGGGCAACT GGCGTCGAAA
ATGCGCTTTT TGTCGGCGCC CTGGGTGGGC CTGCTGGAAG ATGGCGCCTG GTTGCGCCAT
GGCAACCACG CCAACCATTG CGCGCAGCTG CTGGCCTCGC TGGTGAGTGA CTTGCCAGCG
GTGGAGCTGA TGTTCCCGGT GGAGGCCAAC GGGGTGTTCC TGCAGATGCC GGAGCATGCG
ATCGAAGCGC TGCGGGGCAA GGGGTGGCGG TTCTATACCT TCATTGGTAG CGGCGGGGCG
CGCTTCATGT GTTCGTGGGA TACCGAGGAA GCGCGCGTGC GCGAGCTTGC GGCGGATATC
CGTAGCATCA TTACCGCCTG A
|
|---|
| Protein sequence | MTDKSQQFAS DNYSGICPEA WAAMEKANHG HDRAYGDDQW TERASEYFRN LFETDCEVFF
AFNGTAANSL ALASLCQSYH SVICSETAHV ETDECGAPEF FSNGSKLLTA ASVNGKLTPQ
SIREVALKRQ DIHYPKPRVV TITQATEVGT VYRPDELKAI SATCKELGLN LHMDGARFTN
ACAFLGCSPA ELTWKAGVDV LCFGGTKNGM AVGEAILFFN RQLAEDFDYR CKQAGQLASK
MRFLSAPWVG LLEDGAWLRH GNHANHCAQL LASLVSDLPA VELMFPVEAN GVFLQMPEHA
IEALRGKGWR FYTFIGSGGA RFMCSWDTEE ARVRELAADI RSIITA
|
|---|
| |