Gene PputGB1_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_0340 
Symbol 
ID5868080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp393815 
End bp395440 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content65% 
IMG OID641545422 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001666589 
Protein GI167031358 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.582352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTAC GCAACATGAA TATCGCCCCG CGCGCGCTGC TCGGCTTCGC GCTTATCGGC 
CTGCTGATGC TCGGCCTTGG TATCTTCTCC CTGGTGCAGA TGGGCAACAT CCGCCAGGCT
GGCGTTGCCA TCGAGCAAGT CAGTGTGCCC AGCATCAAGA TCCTCGACGA ACTCACCGCG
CTGAACCTGC GCATGCGCAC GCTTTCCTAC CGCCTGCTGC TCAACCGCGA ACCGGAAACC
CAACGCGATA CCCTCAACCT GCTGGACCAG CGCAACAGCC AGATCGACCG CGCGCGCCAG
GCTTACCTGC CGATGATCGG TGCCGCCGAC GAACAGGCCG CGTTCGACCA GTACGGCCTG
TTGCTCAACC AATACCGCCA GTTGGAAGCG CGCATGCGCA CACTGAGCCA GGCCGACCGC
CTGGACGAAT TGCGCGACCT GCTCAACCGC GATTTGCTGG CCAACTCAGA GCAGATCAAC
AAGGTCATGG ACACCCTGGT ACGCATCAAC ACCGACCAGA CCCGCGCCAC CAATGACAAG
GCCGCCAGCC AGTACGCCGC TGCTTTCGCC CTGGTGATCG GCCTGCTGGT TGCCGCCACC
GTCCTGACGT TCGCCTGCGC CTTCCTGCTG ACCCGCAGCA TCGTCAAGCC GATCGAAGAT
GCGCTCAAAA GCGCCGAACA GGTCGCCGAC GGTGACCTGA CCCACATCAT CCGTGCCGAA
GGCACCGACG AAGCCGCTCG CCTGCTGCGC GCCATGGCCC GCATGCAGGA CAAGTTGCGC
GACACCCTGC AACAGATCGC CGGCTCCGCC ACCCAGCTGG CCTCGGCGGC CGAAGAGCTG
AACGCCGTCA CCGACGAAAG CGCCCGCGGC CTGCAACAGC AGAACAACGA GATTGAACAG
GCCGCCACGG CCGTGACCGA AATGACCAGC GCTGTGGAGG AAGTAGCGCG CAATGCCGTG
AGCACTTCGG AAGCCTCCAG TGAAGCCAGC CGCTCCACCG GCGACGGCCG TGACCTGGTG
ATGGAGACCG TGGGCGCCAT CGAGCGCATG AGCGGCGATG TGCAGGCCAC TGCCAAATTG
ATCACTCACC TGGCCGAGCA GTCGCGCGAC ATTGGCAAGG TCCTCGACGT GATCCGTGGC
CTGGCCGACC AAACCAACCT GCTGGCGCTG AACGCCGCCA TCGAGGCCGC ACGTGCTGGC
GAAGCGGGCC GTGGTTTTGC CGTTGTGGCG GATGAAGTTC GGGCATTGGC CCACCGCACC
CAGCAGTCGA CCAGCGAAAT CGAGCGGATG ATCGGCAGCA TTCAAGGGGG CACGGAGGAA
GCTGTGGAGT CGATGCGCAC CAGCACCGAG CGTGCCGAAT CCACCCTGAA CATCGCCCGT
GGCGCGGGCA TGGCACTGGA CACCATTGCC GGCGCGGTGG CGCAGATCAA CGAGCGTAAC
CTGGTGATTG CCAGCGCGGC GGAGGAACAG GCGCAGGTGG CGCGGGAAGT GGACCGCAAC
CTGGTGAACA TCAACGACCT GTCGGTGCAG AGTGCCACCG GGGCGCATCA GACCAGTGCG
GCGAGTGCTG AATTGTCGCG CCTGGCCGTG GACCTGAATG GGTTGGTGGC ACGGTTCCGT
ACCTGA
 
Protein sequence
MSLRNMNIAP RALLGFALIG LLMLGLGIFS LVQMGNIRQA GVAIEQVSVP SIKILDELTA 
LNLRMRTLSY RLLLNREPET QRDTLNLLDQ RNSQIDRARQ AYLPMIGAAD EQAAFDQYGL
LLNQYRQLEA RMRTLSQADR LDELRDLLNR DLLANSEQIN KVMDTLVRIN TDQTRATNDK
AASQYAAAFA LVIGLLVAAT VLTFACAFLL TRSIVKPIED ALKSAEQVAD GDLTHIIRAE
GTDEAARLLR AMARMQDKLR DTLQQIAGSA TQLASAAEEL NAVTDESARG LQQQNNEIEQ
AATAVTEMTS AVEEVARNAV STSEASSEAS RSTGDGRDLV METVGAIERM SGDVQATAKL
ITHLAEQSRD IGKVLDVIRG LADQTNLLAL NAAIEAARAG EAGRGFAVVA DEVRALAHRT
QQSTSEIERM IGSIQGGTEE AVESMRTSTE RAESTLNIAR GAGMALDTIA GAVAQINERN
LVIASAAEEQ AQVAREVDRN LVNINDLSVQ SATGAHQTSA ASAELSRLAV DLNGLVARFR
T