Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_0338 |
Symbol | |
ID | 5868078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 390982 |
End bp | 392274 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641545420 |
Product | Rieske (2Fe-2S) domain-containing protein |
Protein accession | YP_001666587 |
Protein GI | 167031356 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000696422 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTCA CCGCAACCCT GAGCCTGGGC GATCCACTGG AACCTGCACG CAAGGCCACC GCCGAGATGC TGCAGACCCG CGAGCGAACC TACTCGCTGC CCCAGCCTTT CTACACCGAC GAGCGTCTGT TCCAGATCGA CATGCAGGAG ATCTTCCAGA AAGAATGGCT GATCGCCGGC ATGACTTGCG AAATTCCGGC AAAAGGCAAC TACATCACGC TGCAGATCGG CAACAACCCG ATTCTGGTGG TGCGTGGCGC CGAAGGTAAG GTGCACGCCT TCCATAACGT CTGCCGGCAC CGCGGTTCGC GCTTGTGCGT CAGCGACAAA GGCAAAGTGG CCAAGTTGGT CTGCCATTAC CACCAGTGGA CATATGAACT GGACGGCCGC CTGCTGTTCG CGGGCACCGA GATGGGCGCC GACTTCGACA TGAAGCAGTA CGGTCTGAAG CCTGTGAACG TGAAGGTCGC TGGTGGCTAC ATCTTCATCA GCCTGGCGGA AAACCCACCC GCCATCGACG AGTTCCTGGC CACCCTGGAA CACTACATGG AACCCTACGA CATGGAGAAC ACCAAGGTGG CGGTGCAAAC CACCTTGATG GAAAAAGCCA ACTGGAAGCT GGTGCTGGAA AACAACCGCG AGTGCTACCA CTGCAGCGGC TCGCACCCGG AGCTGCTGCA AACCCTGCTG GAGTGGGACG ACACCAACGA CCCGCGCGCC AGCCAGGAAT TCAAGGACCA CGTGGCCGCC TCCGCCGCCG CCTGGGAAGC CGAAAAGATC CCGTACCTGC ACAAGAGCCA CGGCCTGCGT AACCGTATCG TACGCATGCC TCTGCTCAAG GGCACCGTGT CGATGACCAT GGACGGCAAG CAGGCCTGCC AGAAGCTGAT GGGCCGCATC AAGAACCCGG ACCTGGGCTC GATGCGTATC CTGCACCTGC CGCACTCCTG GAACCACTGC ATGGGCGACC ACATGATCGT GTTCACCGTG TGGCCGATCA GCGCCCAGGA GACCATGGTC ACCACCAAAT GGCTGGTGCA CAAGGACGCC GTGGAAGGGG TGGACTACGA CCCTGAGCGC ATGCGCAAGG TGTGGGACGC CACCAACGAC CAGGACCGCC GCCTGGCCGA AGAGAACCAG CGCGGGATCA ACTCCACGGC TTACCAGCCA GGGCCGTACT CGAAAACCTA CGAGTTTGGC GTGGTGAACT TCATCGACTG GTACAGCGGG CGGATGCTGA ACAACCTGGG GGCGGAGCCG GCGGCGTATC TGAAAGAAGT GCAGGCACAG TAA
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Protein sequence | MDVTATLSLG DPLEPARKAT AEMLQTRERT YSLPQPFYTD ERLFQIDMQE IFQKEWLIAG MTCEIPAKGN YITLQIGNNP ILVVRGAEGK VHAFHNVCRH RGSRLCVSDK GKVAKLVCHY HQWTYELDGR LLFAGTEMGA DFDMKQYGLK PVNVKVAGGY IFISLAENPP AIDEFLATLE HYMEPYDMEN TKVAVQTTLM EKANWKLVLE NNRECYHCSG SHPELLQTLL EWDDTNDPRA SQEFKDHVAA SAAAWEAEKI PYLHKSHGLR NRIVRMPLLK GTVSMTMDGK QACQKLMGRI KNPDLGSMRI LHLPHSWNHC MGDHMIVFTV WPISAQETMV TTKWLVHKDA VEGVDYDPER MRKVWDATND QDRRLAEENQ RGINSTAYQP GPYSKTYEFG VVNFIDWYSG RMLNNLGAEP AAYLKEVQAQ
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