| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_0322 |
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| Symbol | |
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| ID | 5868062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 372621 |
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| End bp | 373997 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641545404 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_001666571 |
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| Protein GI | 167031340 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCA GCGTGTTCGA CCTGTTCAAG ATCGGTGTCG GGCCCTCCAG CTCCCACACC
GTCGGCCCCA TGCGTGCTGG CGCCCTGTTC GTTCAGGGCC TGCGCGAACG CGGCGAGCTG
GAGCGTGTGA AACGGATCGA GGTGCGTCTT TACGGCTCGC TGTCGGCCAC CGGTATCGGT
CACGGCACCG ACAACGCCAC CATCATGGGC CTGATGGGCG AATGGCCTGA CGCCATTGAC
CCGACCCAGA TCGTGCCGCG CATCGCCGAC CTGCGCGAAA CCGACACCCT GCAGCTGGAC
GGCCGGCTAC CCATCGAATT CGTCTGGGCC CGCGACATGC TGCTGCTGGA CGAGAACTTG
CCATACCACC CCAACGCCAT GACCCTGATT GCCGAAGGCG AGCAGGGTGA GCTGCACCGC
GACACCTACT ACTCGGTGGG CGGCGGTTTC GTGGTCGATG CTGCCCAGGC CGCCAGCGGC
GTGCTGGATG CCGACCAGAC CGTGCTGCCG TACGACTTCA ACAGCGCCGC GGAACTGCTG
CGCCTGTGCA AGCAAAACGA CCTCAGCGTG TCGCAATTGA TGATGGCCAA CGAGAAGGTC
TGGCGCAGCG AGCAAGAGAT TCGCGCAGGC CTGCACAAGC TCTGGGAGGC CATGCAGGAA
TGCGTCAACA ACGGCCTCAA GTACGAAGGC ACGCTACCTG GCGGGCTGAA TGTGCGCCGC
CGCGCCGCCA AGCTGCACCG CAGCCTGCAG GAAATCGGCA AGCCCAACGT CATCGGCTCG
ACCATGAGCG CCATGGAGTG GGTCAACTTG TTCGCCCTGG CGGTCAACGA AGAAAACGCC
GCCGGCGGGC GCATGGTCAC CGCGCCTACC AATGGCGCGG CCGGGATCAT TCCGGCGGTA
TTGCACTACT ACATGCGTTT TAGCGATGAA GTGGACGAGT CGAGCGTGGT CGACTTCTTC
CTCGGTGCTG CTGCGGTGGG CATCTTGTGC AAGAAGAACG CTTCGATCTC CGGTGCCGAA
GTGGGGTGCC AGGGTGAAGT CGGCTCGGCC TGTGCCATGG CTGCAGCGGG CCTTGCCGAA
GTGCTCGGGG CTACCCCGCC ACAAGTGGAA AACGCTGCTG AAATTGCCCT GGAGCACAAC
CTCGGCCTGA CCTGCGACCC GGTCGGCGGG CTGGTGCAGG TGCCGTGCAT CGAGCGCAAC
GCGATTGCTG CGGTAAAGGC CATCAACGCG GTGCAGATGG CCTTGCGCGG GGACGGTGAG
CACTTCATTT CTCTCGACCA GGTAATCCGC ACCATGCGCG ATACCGGGGC CGACATGCAC
GACAAGTACA AAGAAACCTC GCGCGGTGGC CTGGCTGTCA GTGCTATCGA ATGCTAA
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| Protein sequence | MAISVFDLFK IGVGPSSSHT VGPMRAGALF VQGLRERGEL ERVKRIEVRL YGSLSATGIG
HGTDNATIMG LMGEWPDAID PTQIVPRIAD LRETDTLQLD GRLPIEFVWA RDMLLLDENL
PYHPNAMTLI AEGEQGELHR DTYYSVGGGF VVDAAQAASG VLDADQTVLP YDFNSAAELL
RLCKQNDLSV SQLMMANEKV WRSEQEIRAG LHKLWEAMQE CVNNGLKYEG TLPGGLNVRR
RAAKLHRSLQ EIGKPNVIGS TMSAMEWVNL FALAVNEENA AGGRMVTAPT NGAAGIIPAV
LHYYMRFSDE VDESSVVDFF LGAAAVGILC KKNASISGAE VGCQGEVGSA CAMAAAGLAE
VLGATPPQVE NAAEIALEHN LGLTCDPVGG LVQVPCIERN AIAAVKAINA VQMALRGDGE
HFISLDQVIR TMRDTGADMH DKYKETSRGG LAVSAIEC
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